Global Reaction Route Mapping of C3H2O: Isomerization Pathways, Dissociation Channels, and Bimolecular Reaction with a Water Molecule

A comprehensive theoretical investigation of the C<sub>3</sub>H<sub>2</sub>O potential energy surface (PES) was conducted, revealing 30 equilibrium structures (EQs), 128 transition state structures (TSs), and 35 direct dissociation channels (DCs), establishing a global reaction network comprising 101 isomerization pathways and dissociation channels. Particular focus was placed on the five most stable isomers, H<sub>2</sub>CCCO (EQ3), OC(H)CCH (EQ7), H-<i>c</i>-CC(O)C-H (EQ0), HCC(H)CO (EQ1), and HO-<i>c</i>-CCC-H (EQ12), and their reactions with water molecules. Multicomponent artificial force-induced reaction (MC-AFIR) calculations were employed to study bimolecular collisions between H<sub>2</sub>O and these stable isomers. The product distributions revealed isomer-specific reactivity patterns: EQ3 and EQ7 predominantly formed neutral species at high collision energies, EQ0 produced both ionic and neutral species, while EQ1 and EQ12 exhibited more accessible reaction pathways at lower collision energies with a propensity for spontaneous isomerization. Born-Oppenheimer Molecular Dynamics (BOMD) simulations complemented these findings, suggesting several viable products emerge from reactions with water molecules, including HCCC(OH)<sub>2</sub>H (EQ7 + H<sub>2</sub>O), OCCHCH<sub>2</sub>OH (EQ1 + H<sub>2</sub>O), and HO-<i>c</i>-CC(H)C(OH)-H (EQ12 + H<sub>2</sub>O). This investigation elucidates the intrinsic relationships between isomers and their potential products, formed through biomolecular collisions with water molecules, establishing a fundamental framework for future conformational and reactivity studies of the C<sub>3</sub>H<sub>2</sub>O family.

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Publication Details

Journal
Molecules
Published
2025-04-18
DOI
https://doi.org/10.3390/molecules30081829
Citations
1
Primary Topic
Molecular Spectroscopy and Structure
Type
article
Field-Weighted Citation Impact
0.76

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article

Global Reaction Route Mapping of C3H2O: Isomerization Pathways, Dissociation Channels, and Bimolecular Reaction with a Water Molecule

Naoki Kishimoto, Dapeng Zhang
1 citations
Molecules
Molecular Spectroscopy and Structure
0.76
article

Global Reaction Route Mapping of C3H2O: Isomerization Pathways, Dissociation Channels, and Bimolecular Reaction with a Water Molecule

Naoki Kishimoto, Dapeng Zhang
article en
1 citations

Abstract

A comprehensive theoretical investigation of the C<sub>3</sub>H<sub>2</sub>O potential energy surface (PES) was conducted, revealing 30 equilibrium structures (EQs), 128 transition state structures (TSs), and 35 direct dissociation channels (DCs), establishing a global reaction network comprising 101 isomerization pathways and dissociation channels. Particular focus was placed on the five most stable isomers, H<sub>2</sub>CCCO (EQ3), OC(H)CCH (EQ7), H-<i>c</i>-CC(O)C-H (EQ0), HCC(H)CO (EQ1), and HO-<i>c</i>-CCC-H (EQ12), and their reactions with water molecules. Multicomponent artificial force-induced reaction (MC-AFIR) calculations were employed to study bimolecular collisions between H<sub>2</sub>O and these stable isomers. The product distributions revealed isomer-specific reactivity patterns: EQ3 and EQ7 predominantly formed neutral species at high collision energies, EQ0 produced both ionic and neutral species, while EQ1 and EQ12 exhibited more accessible reaction pathways at lower collision energies with a propensity for spontaneous isomerization. Born-Oppenheimer Molecular Dynamics (BOMD) simulations complemented these findings, suggesting several viable products emerge from reactions with water molecules, including HCCC(OH)<sub>2</sub>H (EQ7 + H<sub>2</sub>O), OCCHCH<sub>2</sub>OH (EQ1 + H<sub>2</sub>O), and HO-<i>c</i>-CC(H)C(OH)-H (EQ12 + H<sub>2</sub>O). This investigation elucidates the intrinsic relationships between isomers and their potential products, formed through biomolecular collisions with water molecules, establishing a fundamental framework for future conformational and reactivity studies of the C<sub>3</sub>H<sub>2</sub>O family.

MoleculesVol. 30(8)
Tohoku University (JP)
Institute for Quantum Chemical Exploration, Japan Society for the Promotion of Science
Openalex Percentile: Top 32%
Molecular Spectroscopy and Structure
0.76
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Global Reaction Route Mapping of C3H2O: Isomerization Pathways, Dissociation Channels, and Bimolecular Reaction with a Water Molecule — Naoki Kishimoto, Dapeng Zhang · Molecules (2025) | TGRS Research Map | TGRS