Quantitative Elucidation of Catalytic Reaction of Truncated Aldehyde Dehydrogenase Based on Linear Free Energy Relationship

Some oxidoreductases can communicate directly and electrically with electrodes; this process is called direct electron transfer (DET)-type bioelectrocatalysis. Understanding its detailed mechanisms is essential for developing and improving DET-based bioelectrochemical devices. In this study, we investigated the pH dependence of kinetic and thermodynamic characteristics of a variant of an aldehyde dehydrogenase (ALDH) without the cytochrome c subunit (ΔC_ALDH) and compared it with that of a wild-type recombinant ALDH (rALDH). Owing to the pronounced DET activity of ΔC_ALDH at multi-walled carbon nanotubes, the voltammograms were analyzed to obtain the enzymatic parameters. The potential difference between the electrode-active site of the enzyme and electron donor (E°′E – E°′D) and the limiting catalytic current density (jcat) exhibited an ideal linear free energy relationship (LFER), suggesting that the catalytic reaction of ΔC_ALDH was controlled by the thermodynamic driving force without any specific interactions. We also measured the ferricyanide reductase activity in solution (ksol) to investigate the effect of electron acceptors (electrode and ferricyanide) on the enzymatic properties. The ksol of ΔC_ALDH has a pH dependence similar to that of jcat; therefore, the experimental data were kinetically analyzed based on the LFER by considering the potential difference between the electron acceptor and electrode-active site of the enzyme (E°′A – E°′E). By integrating the analytical results obtained from the DET-type acetaldehyde oxidation using an electrode and ferricyanide reduction in solution, the catalytic constant for the DET-type bioelectrocatalysis (kDET) and the surface concentration of the effective enzyme immobilized on the electrode (ΓE,eff) of ΔC_ALDH were calculated to be 5000 ± 2000 s–1 and 13 ± 7 pmol cm–2, respectively. This study achieved a detailed evaluation of the multi-step catalytic reactions of redox enzymes and can help elucidate the reaction mechanisms of DET-type bioelectrocatalysis.

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Publication Details

Journal
ACS Catalysis
Published
2025-04-18
DOI
https://doi.org/10.1021/acscatal.4c07978
Citations
3
Primary Topic
Microbial Metabolic Engineering and Bioproduction
Type
article
Field-Weighted Citation Impact
2.42

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article

Quantitative Elucidation of Catalytic Reaction of Truncated Aldehyde Dehydrogenase Based on Linear Free Energy Relationship

Taiki Adachi, Osamu Shirai, Yuki Kitazumi, Keisei Sowa et al.
3 citations
ACS Catalysis
Microbial Metabolic Engineering and Bioproduction
2.42
article

Quantitative Elucidation of Catalytic Reaction of Truncated Aldehyde Dehydrogenase Based on Linear Free Energy Relationship

Taiki Adachi, Osamu Shirai, Yuki Kitazumi, Keisei Sowa, Konatsu Ichikawa
article en
3 citations

Abstract

Some oxidoreductases can communicate directly and electrically with electrodes; this process is called direct electron transfer (DET)-type bioelectrocatalysis. Understanding its detailed mechanisms is essential for developing and improving DET-based bioelectrochemical devices. In this study, we investigated the pH dependence of kinetic and thermodynamic characteristics of a variant of an aldehyde dehydrogenase (ALDH) without the cytochrome c subunit (ΔC_ALDH) and compared it with that of a wild-type recombinant ALDH (rALDH). Owing to the pronounced DET activity of ΔC_ALDH at multi-walled carbon nanotubes, the voltammograms were analyzed to obtain the enzymatic parameters. The potential difference between the electrode-active site of the enzyme and electron donor (E°′E – E°′D) and the limiting catalytic current density (jcat) exhibited an ideal linear free energy relationship (LFER), suggesting that the catalytic reaction of ΔC_ALDH was controlled by the thermodynamic driving force without any specific interactions. We also measured the ferricyanide reductase activity in solution (ksol) to investigate the effect of electron acceptors (electrode and ferricyanide) on the enzymatic properties. The ksol of ΔC_ALDH has a pH dependence similar to that of jcat; therefore, the experimental data were kinetically analyzed based on the LFER by considering the potential difference between the electron acceptor and electrode-active site of the enzyme (E°′A – E°′E). By integrating the analytical results obtained from the DET-type acetaldehyde oxidation using an electrode and ferricyanide reduction in solution, the catalytic constant for the DET-type bioelectrocatalysis (kDET) and the surface concentration of the effective enzyme immobilized on the electrode (ΓE,eff) of ΔC_ALDH were calculated to be 5000 ± 2000 s–1 and 13 ± 7 pmol cm–2, respectively. This study achieved a detailed evaluation of the multi-step catalytic reactions of redox enzymes and can help elucidate the reaction mechanisms of DET-type bioelectrocatalysis.

ACS CatalysisVol. 15(9)
Kyoto University (JP)
Kyoto University, Japan Society for the Promotion of Science, Japan Science and Technology Agency
Affordable and clean energy
Openalex Percentile: Top 12%
Microbial Metabolic Engineering and Bioproduction
2.42
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