Convolutional Neural Network approach to classify mitochondrial morphologies
The morphology of the mitochondrial network is a major indicator of cellular health and function, with changes often linked to various physiological and pathological conditions. As a result, efficient methods to quickly assess mitochondrial shape in cellular populations from microscopy images in a quantitative manner are of high interest for the health and life sciences. Here, we present MitoClass, a deep learning-based software designed for automated mitochondrial classification. MitoClass employs a classification algorithm that categorizes mitochondrial network shapes into three classes: fragmented, intermediate, and elongated. By leveraging super-resolution images, we curated a comprehensive dataset for training, including both high- and low-resolution representations of mitochondrial networks. Using a Convolutional Neural Network (CNN) architecture, our model effectively distinguishes between different mitochondrial morphologies. Through rigorous training and validation, MitoClass provides a fast, accurate, and user-friendly solution for researchers and clinicians to assess the organization of the mitochondrial network as a proxy for studying organelle health and dynamics.
Authors
- Ana J. García‐Sáez (ORCID: https://orcid.org/0000-0002-3894-5945)
- Soumaya Zaghbani (ORCID: https://orcid.org/0000-0003-4148-2790)
- Lukas Faber
Institutions
- University of Cologne (DE)
- Max Planck Institute of Biophysics (DE)
- Cologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases (DE)
Publication Details
- Journal
- Computational Biology and Chemistry
- Published
- 2025-04-17
- DOI
- https://doi.org/10.1016/j.compbiolchem.2025.108477
- Citations
- 1
- Primary Topic
- Machine Learning in Bioinformatics
- Type
- article
- Field-Weighted Citation Impact
- 0.81
Funders
- Alexander von Humboldt-Stiftung
- Deutsche Forschungsgemeinschaft