Molecular docking's pioneering role in materials science. Metal ion site-preference in fluorapatite

Originally created for biological systems, molecular docking has proven to be useful to predict metal ion binding locations and affinities in materials. By using this novel approach, it was possible to estimate the binding energies of Ca2+, Sr2+, Mn2+, Cu2+ and Pr3+ for two different calcium sites in fluorapatite. The data obtained from the crystal structures of doped fluorapatites showed a good agreement with the docking research. The interpretation of docking results was made easier by combining results from DFT calculations with geometrical analysis of crystal structures of small molecules. Notably, this strategy is more favourable than previously used theoretical approaches due to the computational efficiency and the demonstrated reliability.

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Publication Details

Journal
Journal of the Serbian Chemical Society
Published
2025-01-01
DOI
https://doi.org/10.2298/jsc250202028b
Primary Topic
Advanced Materials Characterization Techniques
Type
article
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article

Molecular docking's pioneering role in materials science. Metal ion site-preference in fluorapatite

Marija Petković-Benazzouz, Goran V. Janjić, Igor Radović, Dušan Milojkov
Journal of the Serbian Chemical Society
Advanced Materials Characterization Techniques
article

Molecular docking's pioneering role in materials science. Metal ion site-preference in fluorapatite

Marija Petković-Benazzouz, Goran V. Janjić, Igor Radović, Dušan Milojkov
article en

Abstract

Originally created for biological systems, molecular docking has proven to be useful to predict metal ion binding locations and affinities in materials. By using this novel approach, it was possible to estimate the binding energies of Ca2+, Sr2+, Mn2+, Cu2+ and Pr3+ for two different calcium sites in fluorapatite. The data obtained from the crystal structures of doped fluorapatites showed a good agreement with the docking research. The interpretation of docking results was made easier by combining results from DFT calculations with geometrical analysis of crystal structures of small molecules. Notably, this strategy is more favourable than previously used theoretical approaches due to the computational efficiency and the demonstrated reliability.

Journal of the Serbian Chemical SocietyVol. 90(7-8)
University of East Sarajevo (BA), University of Belgrade (RS), Institute for Technology of Nuclear and other Mineral Raw Materials (RS), Institute of Chemistry, Technology and Metallurgy
Openalex Percentile: Top 93%
Advanced Materials Characterization Techniques
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