Circular RNAs in endometriosis analyzed through RNA sequencing and bioinformatics for expression profile

We detected 371 circular RNAs (circRNAs) showing increased expression and 308 circRNAs displaying decreased expression levels. To validate these findings, we employed quantitative real-time PCR (qRT-PCR) to confirm the expression of the top three differential expressed circRNAs listed in circBase. We inferred potential roles of these differentially expressed circRNAs in endometriosis development by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. Moreover, by examining the circRNA-microRNA-target gene network, we uncovered a plausible mechanism. Specifically, interactions involving the markedly upregulated hsa_circ_000005 and significantly downregulated hsa_circ_000011 with miR-5787 may influence downstream targets, potentially contributing to the pathogenesis of endometriosis. Our study offers a foundational and crucial circRNA expression profile within the framework of endometriosis.

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Publication Details

Journal
PeerJ
Published
2025-04-16
DOI
https://doi.org/10.7717/peerj.19298
Citations
2
Primary Topic
Endometriosis Research and Treatment
Type
article
Field-Weighted Citation Impact
3.40
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article

Circular RNAs in endometriosis analyzed through RNA sequencing and bioinformatics for expression profile

Jing Qian, Bin Lü, Dan-Dan Gui, Yan Yue
2 citations
PeerJ
Endometriosis Research and Treatment
3.40
article

Circular RNAs in endometriosis analyzed through RNA sequencing and bioinformatics for expression profile

Jing Qian, Bin Lü, Dan-Dan Gui, Yan Yue
article en
2 citations

Abstract

We detected 371 circular RNAs (circRNAs) showing increased expression and 308 circRNAs displaying decreased expression levels. To validate these findings, we employed quantitative real-time PCR (qRT-PCR) to confirm the expression of the top three differential expressed circRNAs listed in circBase. We inferred potential roles of these differentially expressed circRNAs in endometriosis development by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. Moreover, by examining the circRNA-microRNA-target gene network, we uncovered a plausible mechanism. Specifically, interactions involving the markedly upregulated hsa_circ_000005 and significantly downregulated hsa_circ_000011 with miR-5787 may influence downstream targets, potentially contributing to the pathogenesis of endometriosis. Our study offers a foundational and crucial circRNA expression profile within the framework of endometriosis.

PeerJVol. 13
Wuhu No 1 People's Hospital (CN)
Good health and well-being
Openalex Percentile: Top 9%
Endometriosis Research and Treatment
3.40
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