DeBasher: a flow-based programming bash extension for the implementation of complex and interactive workflows with stateful processes

DeBasher is an FBP Bash extension that can be useful in a wide range of situations and in particular when implementing complex workflows, workflows with interactivity or triggers, or when a high scalability is required.

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Publication Details

Journal
BMC Bioinformatics
Published
2025-04-16
DOI
https://doi.org/10.1186/s12859-025-06108-1
Primary Topic
Scientific Computing and Data Management
Type
article
Field-Weighted Citation Impact
0.00

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article

DeBasher: a flow-based programming bash extension for the implementation of complex and interactive workflows with stateful processes

Daniel Ortiz-Martínez
BMC Bioinformatics
Scientific Computing and Data Management
article

DeBasher: a flow-based programming bash extension for the implementation of complex and interactive workflows with stateful processes

Daniel Ortiz-Martínez
article en

Abstract

DeBasher is an FBP Bash extension that can be useful in a wide range of situations and in particular when implementing complex workflows, workflows with interactivity or triggers, or when a high scalability is required.

BMC BioinformaticsVol. 26(1)
Universitat de Barcelona (ES)
Universitat de Barcelona
Responsible consumption and production
Openalex Percentile: Top 92%
Scientific Computing and Data Management
DOIOpen Access PDFOpenAlex
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DeBasher: a flow-based programming bash extension for the implementation of complex and interactive workflows with stateful processes — Daniel Ortiz-Martínez · BMC Bioinformatics (2025) | TGRS Research Map | TGRS