Transcriptome Analysis of Cabbage Near-Isogenic Lines Reveals the Involvement of the Plant Defensin Gene PDF1.2 in Fusarium Wilt Resistance

<i>Fusarium</i> wilt of cabbage (<i>Brassica oleracea</i> var. <i>capitata</i>), caused by <i>Fusarium oxysporum</i> f. sp. <i>conglutinans</i> (<i>Foc</i>), poses a significant threat to global cabbage production. Although resistance screening and the initial cloning of resistance genes in cabbage have been previously reported, the specific molecular mechanisms underlying cabbage resistance to <i>Foc</i> remain largely unknown. To elucidate the underlying mechanisms, we performed RNA sequencing analysis on a near-isogenic resistant line YR01_20 and a susceptible NIL line S01_20 by comparing both <i>Foc</i>-inoculated and mock-inoculated conditions. A total of 508.6 million sequencing raw reads (76.8 Gb data volume) were generated across all samples. Bioinformatics analysis of differentially expressed genes (DEGs) between S01_20 and YR01_20 revealed significant enrichment in plant hormone signaling and mitogen-activated protein kinase (MAPK) pathways. Notably, <i>BolC06g030650.2J</i>, encoding the plant defensin protein PDF1.2, was significantly upregulated in both pathways. Real-time quantitative PCR (RT-qPCR) analysis confirmed that <i>PDF1.2</i> was significantly upregulated in the resistant line at 12 h post-inoculation and remained elevated for up to 144 h. Furthermore, transgenic cabbage overexpressing <i>PDF1.2</i> exhibited significantly enhanced resistance to <i>Foc</i>. Taken together, these findings advance our understanding of the molecular mechanisms governing cabbage resistance to <i>Fusarium</i> wilt and identify <i>PDF1.2</i> as a genetic target for breeding <i>Foc</i>-resistant cabbage cultivars through molecular approaches.

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Publication Details

Journal
International Journal of Molecular Sciences
Published
2025-04-16
DOI
https://doi.org/10.3390/ijms26083770
Citations
6
Primary Topic
Plant-Microbe Interactions and Immunity
Type
article
Field-Weighted Citation Impact
10.50

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article

Transcriptome Analysis of Cabbage Near-Isogenic Lines Reveals the Involvement of the Plant Defensin Gene PDF1.2 in Fusarium Wilt Resistance

Jialei Ji, Biju Vadakkemukadiyil Chellappan, А. M. Artemyeva, Cunbao Zhao et al.
6 citations
International Journal of Molecular Sciences
Plant-Microbe Interactions and Immunity
10.50
article

Transcriptome Analysis of Cabbage Near-Isogenic Lines Reveals the Involvement of the Plant Defensin Gene PDF1.2 in Fusarium Wilt Resistance

Jialei Ji, Biju Vadakkemukadiyil Chellappan, А. M. Artemyeva, Cunbao Zhao, Honghao Lv, Lisong Ma, Mu Zhuang, Limei Yang, Ailing Zhou, Yangyong Zhang, Yong Wang, Xing Liu
article en
6 citations

Abstract

<i>Fusarium</i> wilt of cabbage (<i>Brassica oleracea</i> var. <i>capitata</i>), caused by <i>Fusarium oxysporum</i> f. sp. <i>conglutinans</i> (<i>Foc</i>), poses a significant threat to global cabbage production. Although resistance screening and the initial cloning of resistance genes in cabbage have been previously reported, the specific molecular mechanisms underlying cabbage resistance to <i>Foc</i> remain largely unknown. To elucidate the underlying mechanisms, we performed RNA sequencing analysis on a near-isogenic resistant line YR01_20 and a susceptible NIL line S01_20 by comparing both <i>Foc</i>-inoculated and mock-inoculated conditions. A total of 508.6 million sequencing raw reads (76.8 Gb data volume) were generated across all samples. Bioinformatics analysis of differentially expressed genes (DEGs) between S01_20 and YR01_20 revealed significant enrichment in plant hormone signaling and mitogen-activated protein kinase (MAPK) pathways. Notably, <i>BolC06g030650.2J</i>, encoding the plant defensin protein PDF1.2, was significantly upregulated in both pathways. Real-time quantitative PCR (RT-qPCR) analysis confirmed that <i>PDF1.2</i> was significantly upregulated in the resistant line at 12 h post-inoculation and remained elevated for up to 144 h. Furthermore, transgenic cabbage overexpressing <i>PDF1.2</i> exhibited significantly enhanced resistance to <i>Foc</i>. Taken together, these findings advance our understanding of the molecular mechanisms governing cabbage resistance to <i>Fusarium</i> wilt and identify <i>PDF1.2</i> as a genetic target for breeding <i>Foc</i>-resistant cabbage cultivars through molecular approaches.

International Journal of Molecular SciencesVol. 26(8)
Hebei Agricultural University (CN), Institute of Vegetables and Flowers (CN), Chinese Academy of Agricultural Sciences (CN), N.I. Vavilov Research Institute of Plant Industry (RU), King Faisal University (SA)
National Natural Science Foundation of China
Openalex Percentile: Top 2%
Plant-Microbe Interactions and Immunity
10.50
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