Structural characterization, derivatization, and bioactivities of secondary metabolites produced by termite-associated <i>Streptomyces lannensis</i> BYF-106

Two new C-glycoside angucycline-related analogs, urdamycin Y (<b>1</b>) and grincamycin W (<b>2</b>), as well as eight known metabolites (<b>3-10</b>), were identified from termite-associated <i>Streptomyces lannensis</i> BYF-106 based on global natural products social molecular networking (GNPS). The putative biosynthetic pathways of urdamycin Y (<b>1</b>) and grincamycin W (<b>2</b>) were proposed using bioinformatic analysis of the full genome of <i>S. lannensis</i> BYF-106. In addition, four new derivative compounds (<b>4A</b>, <b>5A</b>, <b>6A,</b> and <b>6B</b>) were synthesized via acetylation and methylation, respectively. Partial compounds were evaluated <i>in vitro</i> for antibacterial, anti-inflammatory, and cytotoxic activities. Vineomycinone B2 (<b>3</b>), fridamycin D (<b>4</b>), and 6-hydroxytetrangulol (<b>5</b>) displayed broad-spectrum antibacterial activities against <i>S. aureus</i>, methicillin-resistant <i>S. aureus,</i> and <i>P. syringae</i> pv. <i>actinidae</i>. Furthermore, urdamycin Y (<b>1</b>) exhibited potent inhibition on NO production, with an IC<sub>50</sub> value of 4.8 <i>µ</i>M, which was comparable to that of Bay11-7082 with an IC<sub>50</sub> value of 2.1 µM. Subsequently, the possible anti-inflammatory mechanism of urdamycin Y (<b>1</b>) was explored by molecular docking simulation. Finally, most of the tested metabolites showed significant cytotoxic activities against HCT-116, HT-29, and A375. Notably, 6-hydroxytetrangulol (<b>5</b>) and the acetyl derivative <b>5A</b> showed extremely strong cytotoxic activities against HCT-116, with IC<sub>50</sub> values of 9.8 and 2.2 µM, respectively. Moreover, <b>5A</b> showed extremely strong cytotoxic activity against A375 (IC<sub>50</sub> <0.2 µM), and the conceivable cytotoxic activity mechanism was also proposed by molecular docking. These findings indicated metabolites of insect-associated <i>S. lannensis</i> BYF-106 might be a potential source for developing new bioactive drugs in food, agriculture, and biomedical fields.IMPORTANCEFrequent attention to soil microorganisms has led to the rediscovery of known compounds. By contrast, insect-associated <i>Streptomyces</i> have been shown to produce a more diverse array of unique bioactive secondary metabolites compared to soil <i>Streptomyces</i>. In our ongoing effort to explore structurally diverse bioactive natural products from termite-associated <i>Streptomyces</i>, we discovered that the strain <i>S. lannensis</i> BYF-106 exhibited potent bioactivity. Chemical investigation of BYF-106 resulted in the isolation of two new C-glycoside angucycline-related analogs: urdamycin Y (<b>1</b>) and grincamycin W (<b>2</b>). In addition, four new derivative compounds (<b>4A</b>, <b>5A</b>, <b>6A</b>, and <b>6B</b>) were synthesized through acetylation and methylation, respectively. Urdamycin Y (<b>1</b>) exhibited a strong inhibitory effect on NO production, and most of the tested metabolites showed significant cytotoxic activity. These findings indicate that the metabolites of BYF-106 may offer promising avenues for the exploration and development of new bioactive drugs.

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Journal
Microbiology Spectrum
Published
2025-04-15
DOI
https://doi.org/10.1128/spectrum.01818-24
Citations
3
Primary Topic
Microbial Natural Products and Biosynthesis
Type
article
Field-Weighted Citation Impact
4.18

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article

Structural characterization, derivatization, and bioactivities of secondary metabolites produced by termite-associated Streptomyces lannensis BYF-106

Yinglao Zhang, Taoshan Jiang, M. Liu, Jinbiao Xiong et al.
3 citations
Microbiology Spectrum
Microbial Natural Products and Biosynthesis
4.18
article

Structural characterization, derivatization, and bioactivities of secondary metabolites produced by termite-associated Streptomyces lannensis BYF-106

Yinglao Zhang, Taoshan Jiang, M. Liu, Jinbiao Xiong, YueYue Li, Xinhua Liu, Miao Zhang, Xiaohong Li, Jian Tao, Yaxuan Wang, Shuxiang Zhang, Caiping Yin, Jun Wu
article en
3 citations

Abstract

Two new C-glycoside angucycline-related analogs, urdamycin Y (<b>1</b>) and grincamycin W (<b>2</b>), as well as eight known metabolites (<b>3-10</b>), were identified from termite-associated <i>Streptomyces lannensis</i> BYF-106 based on global natural products social molecular networking (GNPS). The putative biosynthetic pathways of urdamycin Y (<b>1</b>) and grincamycin W (<b>2</b>) were proposed using bioinformatic analysis of the full genome of <i>S. lannensis</i> BYF-106. In addition, four new derivative compounds (<b>4A</b>, <b>5A</b>, <b>6A,</b> and <b>6B</b>) were synthesized via acetylation and methylation, respectively. Partial compounds were evaluated <i>in vitro</i> for antibacterial, anti-inflammatory, and cytotoxic activities. Vineomycinone B2 (<b>3</b>), fridamycin D (<b>4</b>), and 6-hydroxytetrangulol (<b>5</b>) displayed broad-spectrum antibacterial activities against <i>S. aureus</i>, methicillin-resistant <i>S. aureus,</i> and <i>P. syringae</i> pv. <i>actinidae</i>. Furthermore, urdamycin Y (<b>1</b>) exhibited potent inhibition on NO production, with an IC<sub>50</sub> value of 4.8 <i>µ</i>M, which was comparable to that of Bay11-7082 with an IC<sub>50</sub> value of 2.1 µM. Subsequently, the possible anti-inflammatory mechanism of urdamycin Y (<b>1</b>) was explored by molecular docking simulation. Finally, most of the tested metabolites showed significant cytotoxic activities against HCT-116, HT-29, and A375. Notably, 6-hydroxytetrangulol (<b>5</b>) and the acetyl derivative <b>5A</b> showed extremely strong cytotoxic activities against HCT-116, with IC<sub>50</sub> values of 9.8 and 2.2 µM, respectively. Moreover, <b>5A</b> showed extremely strong cytotoxic activity against A375 (IC<sub>50</sub> <0.2 µM), and the conceivable cytotoxic activity mechanism was also proposed by molecular docking. These findings indicated metabolites of insect-associated <i>S. lannensis</i> BYF-106 might be a potential source for developing new bioactive drugs in food, agriculture, and biomedical fields.IMPORTANCEFrequent attention to soil microorganisms has led to the rediscovery of known compounds. By contrast, insect-associated <i>Streptomyces</i> have been shown to produce a more diverse array of unique bioactive secondary metabolites compared to soil <i>Streptomyces</i>. In our ongoing effort to explore structurally diverse bioactive natural products from termite-associated <i>Streptomyces</i>, we discovered that the strain <i>S. lannensis</i> BYF-106 exhibited potent bioactivity. Chemical investigation of BYF-106 resulted in the isolation of two new C-glycoside angucycline-related analogs: urdamycin Y (<b>1</b>) and grincamycin W (<b>2</b>). In addition, four new derivative compounds (<b>4A</b>, <b>5A</b>, <b>6A</b>, and <b>6B</b>) were synthesized through acetylation and methylation, respectively. Urdamycin Y (<b>1</b>) exhibited a strong inhibitory effect on NO production, and most of the tested metabolites showed significant cytotoxic activity. These findings indicate that the metabolites of BYF-106 may offer promising avenues for the exploration and development of new bioactive drugs.

Microbiology SpectrumVol. 13(5)
Anhui Agricultural University (CN), Anhui Medical University (CN), Beijing Normal University (CN), Institute of Natural Science (KP)
National Natural Science Foundation of China
Responsible consumption and production
Openalex Percentile: Top 7%
Microbial Natural Products and Biosynthesis
4.18
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