Dinuclear Gallium(III) Complex With 1,3‐Propanediamine‐ <i>N,N′</i> ‐Diacetate: Structural Characterization, Antimicrobial Activity, and DNA/BSA Interactions

In this study, a tetradentate 1,3-propanediamine-<i>N,N'-</i>diacetate (1,3-pdda<sup>2-</sup>) was utilized for the synthesis of a dinuclear gallium(III) complex, uns-<i>cis</i>-[Ga(1,3-pdda)(<i>µ</i>-OH)]<sub>2</sub> <sup>.</sup>2H<sub>2</sub>O (<b>1</b>). Complex <b>1</b> was characterized using IR and NMR (<sup>1</sup>H and <sup>13</sup>C) spectroscopy, and its crystal structure was determined by single-crystal X-ray diffraction analysis. Both Ga(III) ions in Complex <b>1</b> exhibit octahedral geometry, with each ion coordinated by two nitrogen and two oxygen atoms from the 1,3-pdda<sup>2-</sup> ligand, as well as two oxygen atoms from the bridging hydroxyl groups. IR and NMR (<sup>1</sup>H and <sup>13</sup>C) spectra were simulated using DFT methods, showing a high degree of correlation with experimental data. Hirshfeld surface analysis provided insights into intermolecular interactions, with H⋯O and H⋯H interactions contributing significantly to the crystal stability. The antimicrobial potential of Complex <b>1</b> was evaluated alongside previously synthesized gallium(III) complexes, Na[Ga(1,3-pdta)]·3H<sub>2</sub>O (<b>2</b>) and Ba[Ga(1,3-pndta)]<sub>2</sub>·3H<sub>2</sub>O (<b>3</b>), with 1,3-pdta<sup>4-</sup> (1,3-propanediamine-<i>N,N,N',N'</i>-tetraacetate) and 1,3-pndta<sup>4-</sup> ((±)-1,3-pentanediamine-<i>N,N,N',N'</i>-tetraacetate), respectively. Among all the tested microbial species, the gallium(III) complexes have shown selective activity against <i>Pseudomonas aeruginosa</i> PAO1 strain and were able to reduce pyocyanin production by 40-43% in the clinical isolate BK25H of this bacterium. Moreover, Complexes <b>1</b>-<b>3</b> can modulate the quinolone-mediated quorum sensing system in <i>P. aeruginosa</i> PAO1. Interaction studies with calf thymus DNA (ct-DNA) and bovine serum albumin (BSA) were conducted to evaluate the binding affinity and mode of interaction of Complex <b>1</b> with key biomolecules, aiming to assess its potential for transport via serum proteins and its safety profile in terms of DNA interactions. Spectrofluorimetric experiments and molecular docking revealed that Complex <b>1</b> binds strongly to the Site I on BSA, with weaker interactions at the Site II. While spectrofluorimetric studies showed that Complex <b>1</b> has a slight affinity for minor groove binding or intercalation to ct-DNA, docking studies suggested some minor groove binding, especially in larger DNA sequences, with enhanced stabilization in 10-bp-DNA through hydrogen and carbon bonds.

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Publication Details

Journal
Bioinorganic Chemistry and Applications
Published
2025-01-01
DOI
https://doi.org/10.1155/bca/8097589
Citations
3
Primary Topic
Metal complexes synthesis and properties
Type
article
Field-Weighted Citation Impact
3.14

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article

Dinuclear Gallium(III) Complex With 1,3‐Propanediamine‐ N,N′ ‐Diacetate: Structural Characterization, Antimicrobial Activity, and DNA/BSA Interactions

Dušanka Radanović, Miloš I. Djuran, Biljana Đ. Glišić, Tatjana Ilic‐Tomic et al.
3 citations
Bioinorganic Chemistry and Applications
Metal complexes synthesis and properties
3.14
article

Dinuclear Gallium(III) Complex With 1,3‐Propanediamine‐ N,N′ ‐Diacetate: Structural Characterization, Antimicrobial Activity, and DNA/BSA Interactions

Dušanka Radanović, Miloš I. Djuran, Biljana Đ. Glišić, Tatjana Ilic‐Tomic, Darko P. Ašanin, Žiko Milanović, Iztok Turel, Franc Perdih, Bojana V. Pantović
article en
3 citations

Abstract

In this study, a tetradentate 1,3-propanediamine-<i>N,N'-</i>diacetate (1,3-pdda<sup>2-</sup>) was utilized for the synthesis of a dinuclear gallium(III) complex, uns-<i>cis</i>-[Ga(1,3-pdda)(<i>µ</i>-OH)]<sub>2</sub> <sup>.</sup>2H<sub>2</sub>O (<b>1</b>). Complex <b>1</b> was characterized using IR and NMR (<sup>1</sup>H and <sup>13</sup>C) spectroscopy, and its crystal structure was determined by single-crystal X-ray diffraction analysis. Both Ga(III) ions in Complex <b>1</b> exhibit octahedral geometry, with each ion coordinated by two nitrogen and two oxygen atoms from the 1,3-pdda<sup>2-</sup> ligand, as well as two oxygen atoms from the bridging hydroxyl groups. IR and NMR (<sup>1</sup>H and <sup>13</sup>C) spectra were simulated using DFT methods, showing a high degree of correlation with experimental data. Hirshfeld surface analysis provided insights into intermolecular interactions, with H⋯O and H⋯H interactions contributing significantly to the crystal stability. The antimicrobial potential of Complex <b>1</b> was evaluated alongside previously synthesized gallium(III) complexes, Na[Ga(1,3-pdta)]·3H<sub>2</sub>O (<b>2</b>) and Ba[Ga(1,3-pndta)]<sub>2</sub>·3H<sub>2</sub>O (<b>3</b>), with 1,3-pdta<sup>4-</sup> (1,3-propanediamine-<i>N,N,N',N'</i>-tetraacetate) and 1,3-pndta<sup>4-</sup> ((±)-1,3-pentanediamine-<i>N,N,N',N'</i>-tetraacetate), respectively. Among all the tested microbial species, the gallium(III) complexes have shown selective activity against <i>Pseudomonas aeruginosa</i> PAO1 strain and were able to reduce pyocyanin production by 40-43% in the clinical isolate BK25H of this bacterium. Moreover, Complexes <b>1</b>-<b>3</b> can modulate the quinolone-mediated quorum sensing system in <i>P. aeruginosa</i> PAO1. Interaction studies with calf thymus DNA (ct-DNA) and bovine serum albumin (BSA) were conducted to evaluate the binding affinity and mode of interaction of Complex <b>1</b> with key biomolecules, aiming to assess its potential for transport via serum proteins and its safety profile in terms of DNA interactions. Spectrofluorimetric experiments and molecular docking revealed that Complex <b>1</b> binds strongly to the Site I on BSA, with weaker interactions at the Site II. While spectrofluorimetric studies showed that Complex <b>1</b> has a slight affinity for minor groove binding or intercalation to ct-DNA, docking studies suggested some minor groove binding, especially in larger DNA sequences, with enhanced stabilization in 10-bp-DNA through hydrogen and carbon bonds.

Bioinorganic Chemistry and ApplicationsVol. 2025(1)
Serbian Academy of Sciences and Arts (RS), University of Kragujevac (RS), University of Ljubljana (SI), University of Belgrade (RS), Institute of Molecular Genetics (RU)
Javna Agencija za Raziskovalno Dejavnost RS, Ministarstvo Prosvete, Nauke i Tehnološkog Razvoja, Serbian Academy of Sciences and Arts
Openalex Percentile: Top 8%
Metal complexes synthesis and properties
3.14
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