QMe14S: A Comprehensive and Efficient Spectral Data Set for Small Organic Molecules

Developing machine learning protocols for molecular simulations requires comprehensive and efficient data sets. Here we introduce the QMe14S data set, comprising 186,102 small organic molecules featuring 14 elements (H, B, C, N, O, F, Al, Si, P, S, Cl, As, Se, and Br) and 47 functional groups. Using density functional theory at the B3LYP/TZVP level, we optimized the geometries and calculated properties, including energy, atomic charge, atomic force, dipole moment, quadrupole moment, polarizability, octupole moment, first hyperpolarizability, and Hessian. At the same level, we obtained the harmonic IR, Raman, and NMR spectra. Furthermore, we conducted ab initio molecular dynamics simulations to generate dynamic configurations and extract nonequilibrium properties, including energy, forces, and Hessians. By leveraging our E(3)-equivariant message-passing neural network (DetaNet), we demonstrated that models trained on QMe14S outperform those trained on the previously developed QM9S data set in simulating molecular spectra. The QMe14S data set thus serves as a comprehensive benchmark for molecular simulations, offering valuable insights into structure-property relationships.

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Publication Details

Journal
The Journal of Physical Chemistry Letters
Published
2025-04-14
DOI
https://doi.org/10.1021/acs.jpclett.5c00839
Citations
5
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
2.59

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article

QMe14S: A Comprehensive and Efficient Spectral Data Set for Small Organic Molecules

Wei Hu, Zihan Zou, Yi Luo, Jun Jiang et al.
5 citations
The Journal of Physical Chemistry Letters
Machine Learning in Materials Science
2.59
article

QMe14S: A Comprehensive and Efficient Spectral Data Set for Small Organic Molecules

Wei Hu, Zihan Zou, Yi Luo, Jun Jiang, Moucun Yuan
article en
5 citations

Abstract

Developing machine learning protocols for molecular simulations requires comprehensive and efficient data sets. Here we introduce the QMe14S data set, comprising 186,102 small organic molecules featuring 14 elements (H, B, C, N, O, F, Al, Si, P, S, Cl, As, Se, and Br) and 47 functional groups. Using density functional theory at the B3LYP/TZVP level, we optimized the geometries and calculated properties, including energy, atomic charge, atomic force, dipole moment, quadrupole moment, polarizability, octupole moment, first hyperpolarizability, and Hessian. At the same level, we obtained the harmonic IR, Raman, and NMR spectra. Furthermore, we conducted ab initio molecular dynamics simulations to generate dynamic configurations and extract nonequilibrium properties, including energy, forces, and Hessians. By leveraging our E(3)-equivariant message-passing neural network (DetaNet), we demonstrated that models trained on QMe14S outperform those trained on the previously developed QM9S data set in simulating molecular spectra. The QMe14S data set thus serves as a comprehensive benchmark for molecular simulations, offering valuable insights into structure-property relationships.

The Journal of Physical Chemistry LettersVol. 16(16)
University of Science and Technology of China (CN), Qilu University of Technology (CN), Hefei University (CN), Hefei National Center for Physical Sciences at Nanoscale (CN), Microscale (United States) (US)
National Natural Science Foundation of China, Natural Science Foundation of Shandong Province, Taishan Scholar Project of Shandong Province
Openalex Percentile: Top 11%
Machine Learning in Materials Science
2.59
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