Chromosome-Level Genome Assembly of the Asian Tramp Snail <i>Bradybaena similaris</i> (Stylommatophora: Camaenidae)

While terrestrial land snails have long been used for evolutionary research, a lack of high-quality genomic resources has impeded recent progress. Bradybaena snails in particular have numerous intriguing traits that make them a good model for studying evolution, including shell pattern polymorphism and convergent evolution. They are also introduced and invasive across the world. In this study, we present a chromosome-level genome assembly of the Asian tramp snail Bradybaena similaris, utilizing 88-fold Illumina short-read sequences, 125-fold Nanopore long-read sequences, 63-fold PacBio HiFi sequences, and 47-fold Hi-C sequences. The assembled genome of 2.18 Gb is anchored to 28 chromosomes and exhibits high completeness (single copy, 91.7%; duplicates, 7.1%) and contiguity (N50 of 75.6 Mb). Additionally, we also obtained a high-quality transcriptome for annotation. This resource represents the first chromosome-level assembly for snails in the superfamily Helicoidea, which includes more than 5,000 species of terrestrial snails, and will facilitate genomic study in Bradybaena and, more broadly, in the superfamily Helicoidea.

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Publication Details

Journal
Genome Biology and Evolution
Published
2025-04-12
DOI
https://doi.org/10.1093/gbe/evaf070
Citations
2
Primary Topic
Parasite Biology and Host Interactions
Type
article
Field-Weighted Citation Impact
3.43

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article

Chromosome-Level Genome Assembly of the Asian Tramp Snail Bradybaena similaris (Stylommatophora: Camaenidae)

Satoshi Chiba, Atsushi Toyoda, Kazuki Kimura, Angus Davison et al.
2 citations
Genome Biology and Evolution
Parasite Biology and Host Interactions
3.43
article

Chromosome-Level Genome Assembly of the Asian Tramp Snail Bradybaena similaris (Stylommatophora: Camaenidae)

Satoshi Chiba, Atsushi Toyoda, Kazuki Kimura, Angus Davison, Yasuto Ishii, Osamu Miura, Andrew M. Lewis
article en
2 citations

Abstract

While terrestrial land snails have long been used for evolutionary research, a lack of high-quality genomic resources has impeded recent progress. Bradybaena snails in particular have numerous intriguing traits that make them a good model for studying evolution, including shell pattern polymorphism and convergent evolution. They are also introduced and invasive across the world. In this study, we present a chromosome-level genome assembly of the Asian tramp snail Bradybaena similaris, utilizing 88-fold Illumina short-read sequences, 125-fold Nanopore long-read sequences, 63-fold PacBio HiFi sequences, and 47-fold Hi-C sequences. The assembled genome of 2.18 Gb is anchored to 28 chromosomes and exhibits high completeness (single copy, 91.7%; duplicates, 7.1%) and contiguity (N50 of 75.6 Mb). Additionally, we also obtained a high-quality transcriptome for annotation. This resource represents the first chromosome-level assembly for snails in the superfamily Helicoidea, which includes more than 5,000 species of terrestrial snails, and will facilitate genomic study in Bradybaena and, more broadly, in the superfamily Helicoidea.

Genome Biology and EvolutionVol. 17(5)
National Institute of Genetics (JP), University of Nottingham (GB), Tohoku University (JP), Kōchi University (JP)
Directorate for Biological Sciences, Japan Society for the Promotion of Science
Openalex Percentile: Top 10%
Parasite Biology and Host Interactions
3.43
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Chromosome-Level Genome Assembly of the Asian Tramp Snail <i>Bradybaena similaris</i> (Stylommatophora: Camaenidae) — Satoshi Chiba, Atsushi Toyoda, et al. · Genome Biology and Evolution (2025) | TGRS Research Map | TGRS