Parsimoniously Fitting Large Multivariate Random Effects in <b>glmmTMB</b>

Multivariate random effects with unstructured variance-covariance matrices of large dimensions, q, can be a major challenge to estimate. In this paper, we introduce a new implementation of a reduced-rank approach to fit large dimensional multivariate random effects by writing them as a linear combination of d < q latent variables. By adding reduced-rank functionality to the package glmmTMB, we enhance the mixed models available to include random effects of dimensions that were previously not possible. We apply the reduced-rank random effect to two examples, estimating a generalized latent variable model for multivariate abundance data and a random-slopes model.

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Publication Details

Journal
Journal of Statistical Software
Published
2025-01-01
DOI
https://doi.org/10.18637/jss.v112.i01
Citations
171
Primary Topic
Statistical Methods and Inference
Type
article
Field-Weighted Citation Impact
449.72

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article

Parsimoniously Fitting Large Multivariate Random Effects in glmmTMB

Maeve McGillycuddy, Benjamin M. Bolker, David I. Warton, Gordana Popović
171 citations
Journal of Statistical Software
Statistical Methods and Inference
449.72
article

Parsimoniously Fitting Large Multivariate Random Effects in glmmTMB

Maeve McGillycuddy, Benjamin M. Bolker, David I. Warton, Gordana Popović
article en
171 citations

Abstract

Multivariate random effects with unstructured variance-covariance matrices of large dimensions, q, can be a major challenge to estimate. In this paper, we introduce a new implementation of a reduced-rank approach to fit large dimensional multivariate random effects by writing them as a linear combination of d < q latent variables. By adding reduced-rank functionality to the package glmmTMB, we enhance the mixed models available to include random effects of dimensions that were previously not possible. We apply the reduced-rank random effect to two examples, estimating a generalized latent variable model for multivariate abundance data and a random-slopes model.

Journal of Statistical SoftwareVol. 112(1)
UNSW Sydney (AU), McMaster University (CA)
McMaster University, Analytical Center for the Government of the Russian Federation, University of New South Wales
Openalex Percentile: Top 0%
Statistical Methods and Inference
449.72
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