Genome-Wide Identification and Expression Analysis of m6A Methyltransferase Family in Przewalskia tangutica Maxim.

<i>N</i><sup>6</sup>-methyladenosine (m<sup>6</sup>A) RNA modification plays important regulatory roles in plant development and adaptation to the environment. However, there has been no research regarding m<sup>6</sup>A RNA methyltransferases (MT-A70) in <i>Przewalskia tangutica</i> Maxim. Here, we performed a comprehensive analysis of the MT-A70 family in <i>Przewalskia tangutica</i> (<i>PtMTs</i>), including gene structures, phylogenetic relationships, conserved motifs, gene location, promoter analysis, GO enrichment analysis, and expression profiles. We identified seven <i>PtMT</i> genes. Phylogeny analysis indicated that the seven <i>PtMT</i> genes could be divided into three groups; two MTA genes, three MTB genes, and two MTC genes, and domains and motifs exhibited similar patterns within the same group. These <i>PtMT</i> genes were found to contain a large number of cis-acting elements associated with plant hormones, light response, and stress response, suggesting their widespread regulatory function. Furthermore, the expression profiling of different tissues was investigated using RNA-seq data, and the expression of seven genes was further validated by qPCR analysis. These results provided valuable information to further elucidate the function of m<sup>6</sup>A regulatory genes and their epigenetic regulatory mechanisms in <i>Przewalskia tangutica</i>.

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Journal
International Journal of Molecular Sciences
Published
2025-04-11
DOI
https://doi.org/10.3390/ijms26083593
Primary Topic
RNA modifications and cancer
Type
article
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article

Genome-Wide Identification and Expression Analysis of m6A Methyltransferase Family in Przewalskia tangutica Maxim.

Kaiyue Zhen, Dangwei Zhou, Jing Meng, Hai Du et al.
International Journal of Molecular Sciences
RNA modifications and cancer
article

Genome-Wide Identification and Expression Analysis of m6A Methyltransferase Family in Przewalskia tangutica Maxim.

Kaiyue Zhen, Dangwei Zhou, Jing Meng, Hai Du, Xu Cao, Xing Ye, Xingqiang Hu
article en

Abstract

<i>N</i><sup>6</sup>-methyladenosine (m<sup>6</sup>A) RNA modification plays important regulatory roles in plant development and adaptation to the environment. However, there has been no research regarding m<sup>6</sup>A RNA methyltransferases (MT-A70) in <i>Przewalskia tangutica</i> Maxim. Here, we performed a comprehensive analysis of the MT-A70 family in <i>Przewalskia tangutica</i> (<i>PtMTs</i>), including gene structures, phylogenetic relationships, conserved motifs, gene location, promoter analysis, GO enrichment analysis, and expression profiles. We identified seven <i>PtMT</i> genes. Phylogeny analysis indicated that the seven <i>PtMT</i> genes could be divided into three groups; two MTA genes, three MTB genes, and two MTC genes, and domains and motifs exhibited similar patterns within the same group. These <i>PtMT</i> genes were found to contain a large number of cis-acting elements associated with plant hormones, light response, and stress response, suggesting their widespread regulatory function. Furthermore, the expression profiling of different tissues was investigated using RNA-seq data, and the expression of seven genes was further validated by qPCR analysis. These results provided valuable information to further elucidate the function of m<sup>6</sup>A regulatory genes and their epigenetic regulatory mechanisms in <i>Przewalskia tangutica</i>.

International Journal of Molecular SciencesVol. 26(8)
Qinghai University (CN), Chinese Academy of Sciences (CN), Xinjiang Institute of Ecology and Geography (CN)
Life in Land
Openalex Percentile: Top 93%
RNA modifications and cancer
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