Guided Particle Swarm Optimization for Feature Selection: Application to Cancer Genome Data

Feature selection is a crucial step in the data preprocessing stage of machine learning. It involves selecting a subset of relevant features for use in model construction. Feature selection helps in improving model performance by reducing overfitting, enhancing generalization, and decreasing computational cost. Techniques for feature selection can be broadly classified into filter methods, wrapper methods, and embedded methods. This paper presents a feature selection method based on Particle Swarm Optimization (PSO). The proposed algorithm makes use of a guided particle scheme whereby three filter-based methods are incorporated. The proposed algorithm addresses the issue of premature convergence to global optima compared to other PSO feature-based methods. In addition, the algorithm is tested on very-high-dimensional genome data that include up to 44,909 features. Results of an experimental comparison with other state-of-the-art feature selection algorithms show that the proposed algorithm produces overall better results.

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Publication Details

Journal
Algorithms
Published
2025-04-11
DOI
https://doi.org/10.3390/a18040220
Citations
5
Primary Topic
Gene expression and cancer classification
Type
article
Field-Weighted Citation Impact
4.03
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article

Guided Particle Swarm Optimization for Feature Selection: Application to Cancer Genome Data

Simone A. Ludwig
5 citations
Algorithms
Gene expression and cancer classification
4.03
article

Guided Particle Swarm Optimization for Feature Selection: Application to Cancer Genome Data

Simone A. Ludwig
article en
5 citations

Abstract

Feature selection is a crucial step in the data preprocessing stage of machine learning. It involves selecting a subset of relevant features for use in model construction. Feature selection helps in improving model performance by reducing overfitting, enhancing generalization, and decreasing computational cost. Techniques for feature selection can be broadly classified into filter methods, wrapper methods, and embedded methods. This paper presents a feature selection method based on Particle Swarm Optimization (PSO). The proposed algorithm makes use of a guided particle scheme whereby three filter-based methods are incorporated. The proposed algorithm addresses the issue of premature convergence to global optima compared to other PSO feature-based methods. In addition, the algorithm is tested on very-high-dimensional genome data that include up to 44,909 features. Results of an experimental comparison with other state-of-the-art feature selection algorithms show that the proposed algorithm produces overall better results.

AlgorithmsVol. 18(4)
North Dakota State University (US)
Openalex Percentile: Top 7%
Gene expression and cancer classification
4.03
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