QSAR-Lit: A No-Code Platform for Predictive QSAR Model Development - From Data Curation to Virtual Screening

The development of predictive quantitative structure-activity relationship (QSAR) models using machine learning (ML) algorithms has become increasingly feasible due to the growing availability of chemical libraries with experimental data. These models can accelerate the drug discovery process and reduce failure rates by enabling data-driven decision-making. However, existing standalone software often lacks several critical components necessary for effective data preparation and modeling. Here, we introduce QSAR-Lit, an innovative, no-code, and comprehensive workflow designed for curating chemical and biological data, generating QSAR models, and performing virtual screening through an interactive Python-based Streamlit dashboard. The QSAR model development process begins with data curation, collecting and cleaning data on chemical structures and their biological activities. The next step is model building, where the curated data is used to train and optimize QSAR models. Finally, QSAR-Lit provides virtual screening, allowing QSAR models to predict the activity of new chemical structures. This application efficiently screens libraries of chemical compounds, assisting researchers in identifying and prioritizing potential candidates for further investigation.

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Publication Details

Journal
Journal of the Brazilian Chemical Society
Published
2025-01-01
DOI
https://doi.org/10.21577/0103-5053.20250063
Primary Topic
Geochemistry and Geologic Mapping
Type
article
Field-Weighted Citation Impact
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article

QSAR-Lit: A No-Code Platform for Predictive QSAR Model Development - From Data Curation to Virtual Screening

Igor H. Sanches, Rodolpho C. Braga, Henric Pietro Vicente Gil, Jade Milhomem Lemos et al.
Journal of the Brazilian Chemical Society
Geochemistry and Geologic Mapping
article

QSAR-Lit: A No-Code Platform for Predictive QSAR Model Development - From Data Curation to Virtual Screening

Igor H. Sanches, Rodolpho C. Braga, Henric Pietro Vicente Gil, Jade Milhomem Lemos, Victoria F. Cabral, Elias Costa de Souza, Bruno J. Neves, José Teófilo Moreira‐Filho, Joyce Villa Verde Bastos Borba, Carolina Horta Andrade, Sabrina Silva-Mendonça, Francisco Lucas Feitosa
article en

Abstract

The development of predictive quantitative structure-activity relationship (QSAR) models using machine learning (ML) algorithms has become increasingly feasible due to the growing availability of chemical libraries with experimental data. These models can accelerate the drug discovery process and reduce failure rates by enabling data-driven decision-making. However, existing standalone software often lacks several critical components necessary for effective data preparation and modeling. Here, we introduce QSAR-Lit, an innovative, no-code, and comprehensive workflow designed for curating chemical and biological data, generating QSAR models, and performing virtual screening through an interactive Python-based Streamlit dashboard. The QSAR model development process begins with data curation, collecting and cleaning data on chemical structures and their biological activities. The next step is model building, where the curated data is used to train and optimize QSAR models. Finally, QSAR-Lit provides virtual screening, allowing QSAR models to predict the activity of new chemical structures. This application efficiently screens libraries of chemical compounds, assisting researchers in identifying and prioritizing potential candidates for further investigation.

Journal of the Brazilian Chemical Society
Openalex Percentile: Top 97%
Geochemistry and Geologic Mapping
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