Productivity, Portability, Performance, and Reproducibility: Data-Centric Python

Python has become the <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">de facto</i> language for scientific computing. Programming in Python is highly productive, mainly due to its rich science-oriented software ecosystem built around the NumPy module. As a result, the demand for Python support in High-Performance Computing (HPC) has skyrocketed. However, the Python language itself does not necessarily offer high performance. This work presents a workflow that retains Python’s high productivity while achieving portable performance across different architectures. The workflow’s key features are HPC-oriented language extensions and a set of automatic optimizations powered by a data-centric intermediate representation. We show performance results and scaling across CPU, GPU, FPGA, and the Piz Daint supercomputer (up to 23,328 cores), with 2.47x and 3.75x speedups over previous-best solutions, first-ever Xilinx and Intel FPGA results of annotated Python, and up to 93.16% scaling efficiency on 512 nodes. Our benchmarks were reproduced in the Student Cluster Competition (SCC) during the Supercomputing Conference (SC) 2022. We present and discuss the student teams’ results.

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Publication Details

Journal
IEEE Transactions on Parallel and Distributed Systems
Published
2025-04-09
DOI
https://doi.org/10.1109/tpds.2025.3549310
Citations
1
Primary Topic
Computational Physics and Python Applications
Type
article
Field-Weighted Citation Impact
2.48

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article

Productivity, Portability, Performance, and Reproducibility: Data-Centric Python

Tal Ben‐Nun, Torsten Hoefler, Johannes de Fine Licht, Tiziano De Matteis et al.
1 citations
IEEE Transactions on Parallel and Distributed Systems
Computational Physics and Python Applications
2.48
article

Productivity, Portability, Performance, and Reproducibility: Data-Centric Python

Tal Ben‐Nun, Torsten Hoefler, Johannes de Fine Licht, Tiziano De Matteis, Alexandru Calotoiu, Timo Schneider, Luca Lavarini, Alexandros Nikolaos Ziogas
article en
1 citations

Abstract

Python has become the <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">de facto</i> language for scientific computing. Programming in Python is highly productive, mainly due to its rich science-oriented software ecosystem built around the NumPy module. As a result, the demand for Python support in High-Performance Computing (HPC) has skyrocketed. However, the Python language itself does not necessarily offer high performance. This work presents a workflow that retains Python’s high productivity while achieving portable performance across different architectures. The workflow’s key features are HPC-oriented language extensions and a set of automatic optimizations powered by a data-centric intermediate representation. We show performance results and scaling across CPU, GPU, FPGA, and the Piz Daint supercomputer (up to 23,328 cores), with 2.47x and 3.75x speedups over previous-best solutions, first-ever Xilinx and Intel FPGA results of annotated Python, and up to 93.16% scaling efficiency on 512 nodes. Our benchmarks were reproduced in the Student Cluster Competition (SCC) during the Supercomputing Conference (SC) 2022. We present and discuss the student teams’ results.

IEEE Transactions on Parallel and Distributed SystemsVol. 36(5)
Lawrence Livermore National Laboratory (US), ETH Zurich (CH), Vrije Universiteit Amsterdam (NL)
Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, European Research Council
Decent work and economic growth
Openalex Percentile: Top 11%
Computational Physics and Python Applications
2.48
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