Jointly estimating individual and group networks from fMRI data

In fMRI research, graphical models are used to uncover complex patterns of relationships between brain regions. Connectivity-based fMRI studies typically analyze nested data; raw observations, for example, BOLD responses, are nested within participants, which are nested within populations, for example, healthy controls. Often, studies ignore the nested structure and analyze participants either individually or in aggregate. This overlooks the distinction between within-participant and between-participant variance, which can lead to poor generalizability of results because group-level effects do not necessarily reflect effects for each member of the group and, at worst, risk paradoxical results where group-level effects are opposite to individual-level effects (e.g., Kievit, Frankenhuis, Waldorp, & Borsboom, 2013; Robinson, 2009; Simpson, 1951). To address these concerns, we propose a multilevel approach to model the fMRI networks, using a Gaussian graphical model at the individual level and a Curie-Weiss graphical model at the group level. Simulations show that our method outperforms individual or aggregate analysis in edge retrieval. We apply the proposed multilevel approach to resting-state fMRI data of 724 healthy participants, examining both their commonalities and individual differences. We not only recover the seven previously found resting-state networks at the group level but also observe considerable heterogeneity in the individual-level networks. Finally, we discuss the necessity of a multilevel approach, additional challenges, and possible future extensions.

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Publication Details

Journal
Network Neuroscience
Published
2025-01-01
DOI
https://doi.org/10.1162/netn_a_00457
Primary Topic
Functional Brain Connectivity Studies
Type
article
Field-Weighted Citation Impact
0.00

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article

Jointly estimating individual and group networks from fMRI data

Anouk Schrantee, Zarah van der Pal, Maarten Marsman, Don van den Bergh et al.
Network Neuroscience
Functional Brain Connectivity Studies
article

Jointly estimating individual and group networks from fMRI data

Anouk Schrantee, Zarah van der Pal, Maarten Marsman, Don van den Bergh, Tessa F. Blanken, Linda Douw
article en

Abstract

In fMRI research, graphical models are used to uncover complex patterns of relationships between brain regions. Connectivity-based fMRI studies typically analyze nested data; raw observations, for example, BOLD responses, are nested within participants, which are nested within populations, for example, healthy controls. Often, studies ignore the nested structure and analyze participants either individually or in aggregate. This overlooks the distinction between within-participant and between-participant variance, which can lead to poor generalizability of results because group-level effects do not necessarily reflect effects for each member of the group and, at worst, risk paradoxical results where group-level effects are opposite to individual-level effects (e.g., Kievit, Frankenhuis, Waldorp, & Borsboom, 2013; Robinson, 2009; Simpson, 1951). To address these concerns, we propose a multilevel approach to model the fMRI networks, using a Gaussian graphical model at the individual level and a Curie-Weiss graphical model at the group level. Simulations show that our method outperforms individual or aggregate analysis in edge retrieval. We apply the proposed multilevel approach to resting-state fMRI data of 724 healthy participants, examining both their commonalities and individual differences. We not only recover the seven previously found resting-state networks at the group level but also observe considerable heterogeneity in the individual-level networks. Finally, we discuss the necessity of a multilevel approach, additional challenges, and possible future extensions.

Network NeuroscienceVol. 9(3)
Amsterdam Neuroscience (NL), Amsterdam University Medical Centers (NL), Vrije Universiteit Amsterdam (NL), University of Amsterdam (NL), Hologic (Germany) (DE)
Amsterdam Brain and Cognition
Openalex Percentile: Top 93%
Functional Brain Connectivity Studies
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