Termination sequence between an inducible promoter and ubiquitous chromatin opening element (UCOE) reduces gene expression leakage and silencing
This study reveals a novel limitation of A2UCOE in inducible systems, specifically its contribution to gene leakage, which compromise sensitive systems like direct reprogramming of iPSCs. The inclusion of an SV40 poly-A sequence provides a practical solution and genomic architecture to improve the functionality of A2UCOE-based circuits. It also suggests investigating how termination of transcription modulates gene silencing as a novel design parameter. These findings have significant implications for the design of robust gene circuits, particularly in applications involving iPSCs, regenerative medicine, and cell therapy.
Authors
- Tomoki Yanagi (ORCID: https://orcid.org/0000-0003-1808-2932)
- J. Ayala
- S. Jaramillo
- David M. Truong (ORCID: https://orcid.org/0000-0002-5121-5111)
- Shean Fu Phen
- Deniz Ece Aydin (ORCID: https://orcid.org/0000-0001-6699-793X)
Institutions
- New York University (US)
Publication Details
- Journal
- Journal of Biological Engineering
- Published
- 2025-04-09
- DOI
- https://doi.org/10.1186/s13036-025-00499-8
- Citations
- 4
- Primary Topic
- CRISPR and Genetic Engineering
- Type
- article
- Field-Weighted Citation Impact
- 2.42
Funders
- National Institutes of Health
- National Institute of Allergy and Infectious Diseases