Dipole orientation of hydrated gas phase proteins

In the aerosolization of single proteins from solution, the proteins may be covered by a layer of water. This is relevant to consider in sample delivery for single particle imaging (SPI) with X-ray free-electron lasers. Previous studies suggest that the presence of a 3 Å water layer stabilizes the molecular structure and decreases structural heterogeneity which is important since it facilitates the structure determination in SPI. It has also been shown that SPI would benefit from the possibility of controlling the particle orientation in the interaction region. It has been proposed that such control would be possible by applying a DC electric field that interacts with the intrinsic dipole of the particle. This study investigates how SPI experiments, including dipole orientation, would be affected by the presence of a hydration layer covering the proteins. We investigated this by performing classical MD simulations of a globular protein in gas phase interacting with an external electric field. Two hydration levels were used: a fully desolvated molecule and one with a water layer corresponding to 3 Å covering the proteins surface. Our simulations show that a water layer enables the molecules to orient at lower field amplitudes, and on shorter time scales, as compared to the desolvated case. We also see a marginally larger stability of the molecular structure in the hydrated case at field strengths below 2 V nm<sup>-1</sup>. The presence of a water layer, in combination with an electric field, also tend to stabilize the dipole axis significantly within the molecular structure.

Authors

Institutions

Publication Details

Journal
Physical Chemistry Chemical Physics
Published
2025-01-01
DOI
https://doi.org/10.1039/d5cp00073d
Citations
3
Primary Topic
Hemoglobin structure and function
Type
article
Field-Weighted Citation Impact
3.45

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Dipole orientation of hydrated gas phase proteins

Thomas Mandl, Harald Agelii, Carl Caleman, Emiliano De Santis et al.
3 citations
Physical Chemistry Chemical Physics
Hemoglobin structure and function
3.45
article

Dipole orientation of hydrated gas phase proteins

Thomas Mandl, Harald Agelii, Carl Caleman, Emiliano De Santis, Eric Jakobsson, Erik G. Marklund, Gideon Elfrink
article en
3 citations

Abstract

In the aerosolization of single proteins from solution, the proteins may be covered by a layer of water. This is relevant to consider in sample delivery for single particle imaging (SPI) with X-ray free-electron lasers. Previous studies suggest that the presence of a 3 Å water layer stabilizes the molecular structure and decreases structural heterogeneity which is important since it facilitates the structure determination in SPI. It has also been shown that SPI would benefit from the possibility of controlling the particle orientation in the interaction region. It has been proposed that such control would be possible by applying a DC electric field that interacts with the intrinsic dipole of the particle. This study investigates how SPI experiments, including dipole orientation, would be affected by the presence of a hydration layer covering the proteins. We investigated this by performing classical MD simulations of a globular protein in gas phase interacting with an external electric field. Two hydration levels were used: a fully desolvated molecule and one with a water layer corresponding to 3 Å covering the proteins surface. Our simulations show that a water layer enables the molecules to orient at lower field amplitudes, and on shorter time scales, as compared to the desolvated case. We also see a marginally larger stability of the molecular structure in the hydrated case at field strengths below 2 V nm<sup>-1</sup>. The presence of a water layer, in combination with an electric field, also tend to stabilize the dipole axis significantly within the molecular structure.

Physical Chemistry Chemical PhysicsVol. 27(21)
University of Rome Tor Vergata (IT), University of Applied Sciences Technikum Wien (AT), Uppsala University (SE), Universität Hamburg (DE), Istituto Nazionale di Fisica Nucleare (IT), Center for Free-Electron Laser Science (DE)
Linköpings Universitet, Vetenskapsrådet, Uppsala Universitet, Röntgen-Ångström Cluster, Deutsches Elektronen-Synchrotron
Clean water and sanitation
Openalex Percentile: Top 9%
Hemoglobin structure and function
3.45
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.