Unravelling the Chemical Landscape of <i>Neolitsea pallens</i> Essential Oil: A Comparative Study of Geographical Chemotypes Using t‐<scp>SNE</scp> and Hierarchical Clustering

ABSTRACT Neolitsea pallens essential oil (NPEO) is known for its diverse chemical composition, which can vary significantly depending on geographical origin. In this study, we aimed to explore the chemical variability of NPEOs across different geographical regions using advanced multivariate analysis techniques. The methodology involved the collection of Neolitsea pallens leaves from 13 different locations of Himachal Pradesh, followed by hydrodistillation using a Clevenger‐type apparatus. Comprehensive qualitative and quantitative chemical profiling was conducted using gas chromatography–mass spectrometry (GC–MS) and gas chromatography with flame ionisation detection (GC‐FID) analysis. The GC–MS analysis identified 66 distinct chemical compounds, dominated by sesquiterpenoids, ranging from 10.33% to 59.21%, respectively. Caryophyllene oxide emerged as the major compound, with concentrations ranging from 3.32% ± 0.18% to 33.8% ± 2.43%, with the highest concentration observed in the Shankar dehra location. To elucidate the underlying chemical patterns, differentiate between geographical chemotypes and explore altitudinal correlations between locations, we employed both t‐distributed stochastic neighbour embedding (t‐SNE), hierarchical clustering analysis (HCA) and Pearson's correlation matrix. The chemotypes were identified as caryophyllene oxide, β ‐caryophyllene, β ‐sabinene and α ‐muurolene‐14‐ol. This study highlights for the very first time the significant influence of geographic location on the chemical composition of NPEOs. These variations highlight the need for considering geographical factors when utilising NPEOs for industrial or therapeutic applications. The integration of t‐SNE and hierarchical clustering offers a robust framework for chemotype differentiation, providing deeper insights into the chemical diversity of this species.

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Journal
Flavour and Fragrance Journal
Published
2025-04-09
DOI
https://doi.org/10.1002/ffj.3865
Primary Topic
Metabolomics and Mass Spectrometry Studies
Type
article
Field-Weighted Citation Impact
0.00

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article

Unravelling the Chemical Landscape of Neolitsea pallens Essential Oil: A Comparative Study of Geographical Chemotypes Using t‐SNE and Hierarchical Clustering

Y. C. Tripathi, V. K. Varshney, Nisha Thakur
Flavour and Fragrance Journal
Metabolomics and Mass Spectrometry Studies
article

Unravelling the Chemical Landscape of Neolitsea pallens Essential Oil: A Comparative Study of Geographical Chemotypes Using t‐SNE and Hierarchical Clustering

Y. C. Tripathi, V. K. Varshney, Nisha Thakur
article en

Abstract

ABSTRACT Neolitsea pallens essential oil (NPEO) is known for its diverse chemical composition, which can vary significantly depending on geographical origin. In this study, we aimed to explore the chemical variability of NPEOs across different geographical regions using advanced multivariate analysis techniques. The methodology involved the collection of Neolitsea pallens leaves from 13 different locations of Himachal Pradesh, followed by hydrodistillation using a Clevenger‐type apparatus. Comprehensive qualitative and quantitative chemical profiling was conducted using gas chromatography–mass spectrometry (GC–MS) and gas chromatography with flame ionisation detection (GC‐FID) analysis. The GC–MS analysis identified 66 distinct chemical compounds, dominated by sesquiterpenoids, ranging from 10.33% to 59.21%, respectively. Caryophyllene oxide emerged as the major compound, with concentrations ranging from 3.32% ± 0.18% to 33.8% ± 2.43%, with the highest concentration observed in the Shankar dehra location. To elucidate the underlying chemical patterns, differentiate between geographical chemotypes and explore altitudinal correlations between locations, we employed both t‐distributed stochastic neighbour embedding (t‐SNE), hierarchical clustering analysis (HCA) and Pearson's correlation matrix. The chemotypes were identified as caryophyllene oxide, β ‐caryophyllene, β ‐sabinene and α ‐muurolene‐14‐ol. This study highlights for the very first time the significant influence of geographic location on the chemical composition of NPEOs. These variations highlight the need for considering geographical factors when utilising NPEOs for industrial or therapeutic applications. The integration of t‐SNE and hierarchical clustering offers a robust framework for chemotype differentiation, providing deeper insights into the chemical diversity of this species.

Flavour and Fragrance JournalVol. 40(4)
Forest Research Institute (IN), Indian Council of Forestry Research and Education (IN)
Ministry of Environment, Ministry of Environment, Forest and Climate Change, Indian Council of Forestry Research and Education
Openalex Percentile: Top 94%
Metabolomics and Mass Spectrometry Studies
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