Accelerating iterative ptychography with an integrated neural network
Electron ptychography is a powerful and versatile tool for high-resolution and dose-efficient imaging. Iterative reconstruction algorithms are powerful but also computationally expensive due to their relative complexity and the many hyperparameters that must be optimised. Gradient descent-based iterative ptychography is a popular method, but it may converge slowly when reconstructing low spatial frequencies. In this work, we present a method for accelerating a gradient descent-based iterative reconstruction algorithm by training a neural network (NN) that is applied in the reconstruction loop. The NN works in Fourier space and selectively boosts low spatial frequencies, thus enabling faster convergence in a manner similar to accelerated gradient descent algorithms. We discuss the difficulties that arise when incorporating a NN into an iterative reconstruction algorithm and show how they can be overcome with iterative training. We apply our method to simulated and experimental data of gold nanoparticles on amorphous carbon and show that we can significantly speed up ptychographic reconstruction of the nanoparticles.
Authors
- Arthur R. C. McCray (ORCID: https://orcid.org/0000-0001-6077-4698)
- Stephanie M. Ribet (ORCID: https://orcid.org/0000-0002-7117-066X)
- Colin Ophus
- Georgios Varnavides (ORCID: https://orcid.org/0000-0001-8338-3323)
Institutions
- Lawrence Berkeley National Laboratory (US)
- Miller College (US)
- University of California, Berkeley (US)
- Stanford University (US)
Publication Details
- Journal
- Journal of Microscopy
- Published
- 2025-04-07
- DOI
- https://doi.org/10.1111/jmi.13407
- Citations
- 1
- Primary Topic
- Advanced X-ray Imaging Techniques
- Type
- article
- Field-Weighted Citation Impact
- 1.88
Funders
- U.S. Department of Energy
- Adolph C. and Mary Sprague Miller Institute for Basic Research in Science, University of California Berkeley
- National Energy Research Scientific Computing Center
- Office of Science
- Basic Energy Sciences