Crystal structure and Hirshfeld surface analysis of the fungicide metconazole
Metconazole is a systemic triazole fungicide that inhibits the ergosterol bio-synthesis pathway. It is widely used in agriculture to control fungal infections, including rusts, fusarium and septoria diseases. The mol-ecular structure is a three-ring system, namely, 5-(4-chlorobenz-yl)-2,2-dimethyl-1-(1<i>H</i>-1,2,4-triazol-1-ylmeth-yl)cyclo-pentan-1-ol, C<sub>17</sub>H<sub>22</sub>ClN<sub>3</sub>O, consisting of a cyclo-pentan-1-ol with 1,2,4-triazol-1-ylmethyl, <i>gem</i>-dimethyl and 4-chloro-benzyl groups attached at the 1-, 2- and 5-positions of the cyclo-penta-nol ring. It has two stereocentres (cyclo-penta-nol positions 1 and 5) leading to four stereoisomers, with the (1<i>S</i>,5<i>R</i>) form being the most bioactive. Despite its agricultural significance, detailed crystallographic data remain scarce. This study reports the crystal structure and Hirshfeld surface analysis of racemic <i>cis</i>-metconazole [(1<i>S</i>,5<i>R</i>)/(1<i>R</i>,5<i>S</i>)], determined in the monoclinic space group <i>P</i>2<sub>1</sub>/<i>c</i> with two independent mol-ecules in the asymmetric unit (<i>Z</i>' = 2). Both exhibit similar conformations, with minor differences in the cyclo-penta-nol ring puckering and the torsion angles between the three rings. The crystal packing consists of 2<sub>1</sub>-screw-related hy-dro-gen-bonded chains parallel to the <i>b</i> axis, with additional weak C-H⋯N and C-H⋯Cl contacts linking adjacent mol-ecules. Hirshfeld surface analysis indicates that inter-molecular inter-actions are dominated by contacts involving hy-dro-gen (96.1 and 96.7% for the two mol-ecules).
Authors
- Sean Parkin (ORCID: https://orcid.org/0000-0001-5777-3918)
- H.S. Yathirajan (ORCID: https://orcid.org/0000-0001-9039-0273)
- Thaluru M. Mohan Kumar
- Chaluvarangaiah Sowbhagya
Institutions
- University of Kentucky (US)
- University of Mysore (IN)
- Amrita Vishwa Vidyapeetham (IN)
Publication Details
- Journal
- Acta Crystallographica Section E Crystallographic Communications
- Published
- 2025-04-08
- DOI
- https://doi.org/10.1107/s205698902500310x
- Citations
- 3
- Primary Topic
- Fungal Plant Pathogen Control
- Type
- article
- Field-Weighted Citation Impact
- 9.08