Data Augmentation for Surgical Scene Segmentation with Anatomy-Aware Diffusion Models

In computer-assisted surgery, automatically recognizing anatomical organs is crucial for understanding the surgical scene and providing intraoperative assistance. While machine learning models can identify such structures, their deployment is hindered by the need for labeled, diverse surgical datasets with anatomical annotations. Labeling multiple classes (i.e., organs) in a surgical scene is time-intensive, requiring medical experts. Although syntheti-cally generated images can enhance segmentation performance, maintaining both organ structure and texture during generation is challenging. We introduce a multi-stage approach using diffusion models to generate multi-class surgical datasets with annotations. Our framework improves anatomy awareness by training organ specific models with an inpainting objective guided by binary segmen-tation masks. The organs are generated with an inference pipeline using pre-trained ControlNet to maintain the organ structure. The synthetic multi-class datasets are constructed through an image composition step, ensuring structural and textural consistency. This versatile approach allows the generation of multi-class datasets from real binary datasets and simulated surgical masks. We thoroughly evaluate the generated datasets on image quality and down-stream segmentation, achieving a 15% improvement in segmentation scores when combined with real images.

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Publication Details

Published
2025-02-26
DOI
https://doi.org/10.1109/wacv61041.2025.00228
Citations
6
Primary Topic
Radiomics and Machine Learning in Medical Imaging
Type
article
Field-Weighted Citation Impact
8.16
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article

Data Augmentation for Surgical Scene Segmentation with Anatomy-Aware Diffusion Models

Stefanie Speidel, Danush Kumar Venkatesh, Fiona R. Kolbinger, Dominik Rivoir et al.
6 citations
Radiomics and Machine Learning in Medical Imaging
8.16
article

Data Augmentation for Surgical Scene Segmentation with Anatomy-Aware Diffusion Models

Stefanie Speidel, Danush Kumar Venkatesh, Fiona R. Kolbinger, Dominik Rivoir, Micha Pfeiffer
article en
6 citations

Abstract

In computer-assisted surgery, automatically recognizing anatomical organs is crucial for understanding the surgical scene and providing intraoperative assistance. While machine learning models can identify such structures, their deployment is hindered by the need for labeled, diverse surgical datasets with anatomical annotations. Labeling multiple classes (i.e., organs) in a surgical scene is time-intensive, requiring medical experts. Although syntheti-cally generated images can enhance segmentation performance, maintaining both organ structure and texture during generation is challenging. We introduce a multi-stage approach using diffusion models to generate multi-class surgical datasets with annotations. Our framework improves anatomy awareness by training organ specific models with an inpainting objective guided by binary segmen-tation masks. The organs are generated with an inference pipeline using pre-trained ControlNet to maintain the organ structure. The synthetic multi-class datasets are constructed through an image composition step, ensuring structural and textural consistency. This versatile approach allows the generation of multi-class datasets from real binary datasets and simulated surgical masks. We thoroughly evaluate the generated datasets on image quality and down-stream segmentation, achieving a 15% improvement in segmentation scores when combined with real images.

Heidelberg University (DE), University Hospital Heidelberg (DE), University Hospital Carl Gustav Carus (DE)
Openalex Percentile: Top 2%
Radiomics and Machine Learning in Medical Imaging
8.16
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