The chromosome-level genome of water hyacinth (Eichhornia crassipes)
A chromosome-level genome for water hyacinth was constructed by combing MGI short-reads sequencing, PacBio HiFi (High-fidelity) sequencing, and Hi-C sequencing, which resulted in ca. 1132.2 Mb in size the contig and scaffold N50 length of 18.76 Mb and 69.84 Mb, respectively. A total of 1024.36 Mb (90.47%) of the assembled sequences were anchored to 16 pseudochromosomes, dividing into subgenome A (468.72 Mb in size) and subgenome B (555.64 Mb in size). A total of 57,683 protein-coding genes were predicted, including 25,445 protein-coding genes for subgenome A and 27,992 protein-coding genes for subgenome B. Furthermore, the LAI and QV scores of the water hyacinth genome were 12.32 and 48.91, respectively.
Authors
- Zhihao Qian (ORCID: https://orcid.org/0000-0002-9480-1110)
- Jingshan Yang (ORCID: https://orcid.org/0000-0002-4394-8040)
- Zhizhong Li (ORCID: https://orcid.org/0000-0001-5823-5636)
- Jinming Chen (ORCID: https://orcid.org/0000-0002-3425-5939)
Institutions
- Wuhan Botanical Garden (CN)
- University of Chinese Academy of Sciences (CN)
Publication Details
- Journal
- BMC Genomic Data
- Published
- 2025-04-09
- DOI
- https://doi.org/10.1186/s12863-025-01317-2
- Citations
- 2
- Primary Topic
- Biological Control of Invasive Species
- Type
- article
- Field-Weighted Citation Impact
- 3.34
Funders
- Chinese Academy of Sciences