An interpretable machine learning technique to identify the key meteorological factors influencing the incidence of wheat Fusarium head blight in Korea

• Fusarium Head Blight (FHB) of wheat in Korea depends more on yearly meteorological variations than geographical features. • Machine learning was used to investigate the key meteorological factors influencing the FHB epidemic in Korea. • Interpretable machine learning technique identified not only important variables but also their critical thresholds. • 75 % relative humidity during heading and flowering and 60 mm precipitation during flowering are critical for FHB. Fusarium Head Blight (FHB), predominantly caused by Fusarium asiaticum , represents a major threat to wheat production in Korea, resulting in yield losses, severe economic consequences, and increased risks of mycotoxin-induced health disorders, including liver damage, immune dysfunction, carcinogenesis, and reproductive impairments, in both humans and animals. Nevertheless, there is a limited understanding of the growth stage-specific environmental conditions favoring FHB occurrence in wheat growing fields. In this study, we successfully applied an interpretable machine learning technique to identify the key meteorological variables influencing FHB in Korea. Nationwide FHB incidence data, collected from all wheat-growing regions between 2015 and 2021, were utilized for this analysis. Two machine learning models, Random Forest (RF) and Boosted Regression Trees (BRT), were employed because they generally exhibit lower sensitivity to correlations among variables than statistical models and require smaller datasets than deep learning methods. Using these models, we identified three key variables and their critical thresholds for FHB occurrence in Korea: a relative humidity (Rhum) of 75 % during the heading period, and an Rhum of 75 % combined with 60 mm of precipitation during the flowering period. Furthermore, exceeding two or all three of these thresholds significantly increased FHB incidence compared to exceeding only a single threshold. Overall, this study revealed the feasibility and potential applicability of interpretable machine learning techniques to better understand the relationship between disease incidence and environmental conditions not only for wheat FHB but also other plant diseases.

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Publication Details

Journal
Computers and Electronics in Agriculture
Published
2025-04-08
DOI
https://doi.org/10.1016/j.compag.2025.110355
Primary Topic
Mycotoxins in Agriculture and Food
Type
article
Field-Weighted Citation Impact
0.00

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article

An interpretable machine learning technique to identify the key meteorological factors influencing the incidence of wheat Fusarium head blight in Korea

N. S. Lee, Yul-Ho Kim, Jung‐Wook Yang, Kwang‐Hyung Kim et al.
Computers and Electronics in Agriculture
Mycotoxins in Agriculture and Food
article

An interpretable machine learning technique to identify the key meteorological factors influencing the incidence of wheat Fusarium head blight in Korea

N. S. Lee, Yul-Ho Kim, Jung‐Wook Yang, Kwang‐Hyung Kim, Jinyong Jung
article en

Abstract

• Fusarium Head Blight (FHB) of wheat in Korea depends more on yearly meteorological variations than geographical features. • Machine learning was used to investigate the key meteorological factors influencing the FHB epidemic in Korea. • Interpretable machine learning technique identified not only important variables but also their critical thresholds. • 75 % relative humidity during heading and flowering and 60 mm precipitation during flowering are critical for FHB. Fusarium Head Blight (FHB), predominantly caused by Fusarium asiaticum , represents a major threat to wheat production in Korea, resulting in yield losses, severe economic consequences, and increased risks of mycotoxin-induced health disorders, including liver damage, immune dysfunction, carcinogenesis, and reproductive impairments, in both humans and animals. Nevertheless, there is a limited understanding of the growth stage-specific environmental conditions favoring FHB occurrence in wheat growing fields. In this study, we successfully applied an interpretable machine learning technique to identify the key meteorological variables influencing FHB in Korea. Nationwide FHB incidence data, collected from all wheat-growing regions between 2015 and 2021, were utilized for this analysis. Two machine learning models, Random Forest (RF) and Boosted Regression Trees (BRT), were employed because they generally exhibit lower sensitivity to correlations among variables than statistical models and require smaller datasets than deep learning methods. Using these models, we identified three key variables and their critical thresholds for FHB occurrence in Korea: a relative humidity (Rhum) of 75 % during the heading period, and an Rhum of 75 % combined with 60 mm of precipitation during the flowering period. Furthermore, exceeding two or all three of these thresholds significantly increased FHB incidence compared to exceeding only a single threshold. Overall, this study revealed the feasibility and potential applicability of interpretable machine learning techniques to better understand the relationship between disease incidence and environmental conditions not only for wheat FHB but also other plant diseases.

Computers and Electronics in AgricultureVol. 235
Seoul National University (KR), Rural Development Administration (KR)
Ministry of Agriculture, Food and Rural Affairs, Rural Development Administration, Korea Institute of Planning and Evaluation for Technology in Food, Agriculture, Forestry and Fisheries
Climate action
Openalex Percentile: Top 95%
Mycotoxins in Agriculture and Food
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