Optimizing Clinical Data Enrichment for Intelligent Research

Enhancing the secondary use of data from routine care through external data enrichment methods can significantly boost its quality. This paper demonstrates a process-driven prototyping approach that separates sensitive and non-sensitive data, empowering medical experts to map medical concepts in free text to standardized terminology codes, all while granting data protection and information security. This approach is based on a prototype-oriented framework developed through discussions in a focus group. It consists of four integral components: (A) Clinical Data Repository, (B) Transition Database, (C) Mapping Tools and (D) Validation Tools. Data flows between the components contain medical concepts in free text and structured lists of suggested or validated standard codes. They are operated with the help of extract, transform and load processes as well as workflow management tools. By utilizing the components along the process, quality-assured medical concepts and their mapping can be provided for the secondary use of routine patient data for research.

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Publication Details

Journal
Studies in health technology and informatics
Published
2025-04-08
DOI
https://doi.org/10.3233/shti250111
Primary Topic
Biomedical Text Mining and Ontologies
Type
article
Field-Weighted Citation Impact
0.00
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article

Optimizing Clinical Data Enrichment for Intelligent Research

Ines Reinecke, Richard Gebler, Michéle Zoch, Martin Sedlmayr et al.
Studies in health technology and informatics
Biomedical Text Mining and Ontologies
article

Optimizing Clinical Data Enrichment for Intelligent Research

Ines Reinecke, Richard Gebler, Michéle Zoch, Martin Sedlmayr, Christian Gierschner
article en

Abstract

Enhancing the secondary use of data from routine care through external data enrichment methods can significantly boost its quality. This paper demonstrates a process-driven prototyping approach that separates sensitive and non-sensitive data, empowering medical experts to map medical concepts in free text to standardized terminology codes, all while granting data protection and information security. This approach is based on a prototype-oriented framework developed through discussions in a focus group. It consists of four integral components: (A) Clinical Data Repository, (B) Transition Database, (C) Mapping Tools and (D) Validation Tools. Data flows between the components contain medical concepts in free text and structured lists of suggested or validated standard codes. They are operated with the help of extract, transform and load processes as well as workflow management tools. By utilizing the components along the process, quality-assured medical concepts and their mapping can be provided for the secondary use of routine patient data for research.

Studies in health technology and informaticsVol. 323
University Hospital Carl Gustav Carus (DE)
Openalex Percentile: Top 87%
Biomedical Text Mining and Ontologies
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