CoverM: read alignment statistics for metagenomics
CoverM is free software available at https://github.com/wwood/coverm. CoverM is implemented in Rust, with Python (https://github.com/apcamargo/pycoverm) and Julia (https://github.com/JuliaBinaryWrappers/CoverM_jll.jl) interfaces.
Authors
- Jakob Nybo Nissen (ORCID: https://orcid.org/0000-0003-2860-7982)
- Ben J. Woodcroft (ORCID: https://orcid.org/0000-0003-0670-7480)
- Gene W. Tyson (ORCID: https://orcid.org/0000-0001-8559-9427)
- Antônio Pedro Camargo (ORCID: https://orcid.org/0000-0003-3913-2484)
- R.B. Newell (ORCID: https://orcid.org/0000-0002-1300-6116)
- Samuel T. N. Aroney (ORCID: https://orcid.org/0000-0001-9806-5846)
Institutions
- University of Copenhagen (DK)
- Translational Research Institute (AU)
- Lawrence Berkeley National Laboratory (US)
- Queensland University of Technology (AU)
- Universidade Estadual de Campinas (UNICAMP) (BR)
- Joint Genome Institute (US)
- Novo Nordisk Foundation (DK)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-03-29
- DOI
- https://doi.org/10.1093/bioinformatics/btaf147
- Citations
- 279
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 223.27
Funders
- National Science Foundation
- U.S. Department of Energy
- Joint Genome Institute
- Fundação de Amparo à Pesquisa do Estado de São Paulo
- Office of Science
- Biological and Environmental Research