<scp>TractCloud</scp>‐<scp>FOV</scp>: Deep Learning‐Based Robust Tractography Parcellation in Diffusion <scp>MRI</scp> With Incomplete Field of View

Tractography parcellation classifies streamlines reconstructed from diffusion MRI into anatomically defined fiber tracts for clinical and research applications. However, clinical scans often have incomplete fields of view (FOV) where brain regions are partially imaged, leading to partial, or truncated fiber tracts. To address this challenge, we introduce TractCloud-FOV, a deep learning framework that robustly parcellates tractography under conditions of incomplete FOV. We propose a novel training strategy, FOV-Cut Augmentation (FOV-CA), in which we synthetically cut tractograms to simulate a spectrum of real-world inferior FOV cutoff scenarios. This data augmentation approach enriches the training set with realistic truncated streamlines, enabling the model to achieve superior generalization. We evaluate the proposed TractCloud-FOV on both synthetically cut tractography and two real-life datasets with incomplete FOV. TractCloud-FOV significantly outperforms several state-of-the-art methods on all testing datasets in terms of streamline classification accuracy, generalization ability, tract anatomical depiction, and computational efficiency. Overall, TractCloud-FOV achieves efficient and consistent tractography parcellation in diffusion MRI with incomplete FOV.

Authors

Institutions

Publication Details

Journal
Human Brain Mapping
Published
2025-04-01
DOI
https://doi.org/10.1002/hbm.70201
Citations
5
Primary Topic
Advanced Neuroimaging Techniques and Applications
Type
article
Field-Weighted Citation Impact
5.44

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

TractCloud‐FOV: Deep Learning‐Based Robust Tractography Parcellation in Diffusion MRI With Incomplete Field of View

Suheyla Cetin‐Karayumak, Yogesh Rathi, Leo Zekelman, Tengfei Xue et al.
5 citations
Human Brain Mapping
Advanced Neuroimaging Techniques and Applications
5.44
article

TractCloud‐FOV: Deep Learning‐Based Robust Tractography Parcellation in Diffusion MRI With Incomplete Field of View

Suheyla Cetin‐Karayumak, Yogesh Rathi, Leo Zekelman, Tengfei Xue, Weidong Cai, Lauren J. O’Donnell, Fan Zhang, Nikos Makris, Yui Lo, Yuqian Chen
article en
5 citations

Abstract

Tractography parcellation classifies streamlines reconstructed from diffusion MRI into anatomically defined fiber tracts for clinical and research applications. However, clinical scans often have incomplete fields of view (FOV) where brain regions are partially imaged, leading to partial, or truncated fiber tracts. To address this challenge, we introduce TractCloud-FOV, a deep learning framework that robustly parcellates tractography under conditions of incomplete FOV. We propose a novel training strategy, FOV-Cut Augmentation (FOV-CA), in which we synthetically cut tractograms to simulate a spectrum of real-world inferior FOV cutoff scenarios. This data augmentation approach enriches the training set with realistic truncated streamlines, enabling the model to achieve superior generalization. We evaluate the proposed TractCloud-FOV on both synthetically cut tractography and two real-life datasets with incomplete FOV. TractCloud-FOV significantly outperforms several state-of-the-art methods on all testing datasets in terms of streamline classification accuracy, generalization ability, tract anatomical depiction, and computational efficiency. Overall, TractCloud-FOV achieves efficient and consistent tractography parcellation in diffusion MRI with incomplete FOV.

Human Brain MappingVol. 46(5)
Boston University (US), Brigham and Women's Hospital (US), The University of Sydney (AU), Harvard University (US), University of Electronic Science and Technology of China (CN), Harvard University Press (US), Massachusetts General Hospital (US), Harvard–MIT Division of Health Sciences and Technology (US)
National Natural Science Foundation of China, National Institutes of Health, National Key Research and Development Program of China
Openalex Percentile: Top 5%
Advanced Neuroimaging Techniques and Applications
5.44
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.