Racemization-free peptide bond formation <i>via</i> 2-nitrobenzensulfonyl strategy for diastereoselective synthesis of (<i>Z</i>)-fluoroalkene-type peptidomimetics

The Xaa-Pro-type (<i>Z</i>)-fluoroalkene dipeptide isostere (FADI) serves as a versatile surrogate for peptide bonds, effectively restricting <i>cis</i>-<i>trans</i> isomerization of the prolyl amide bond and offering advantages in the development of conformationally constrained peptide analogues. However, the diastereoselective synthesis of tripeptidomimetics incorporating Xaa-Pro-type FADIs is challenging due to the high susceptibility to racemization of the α-stereogenic center during peptide bond formation. Here, we introduce a racemization- and epimerization-free coupling strategy for the stereoselective synthesis of fluoroalkene-type peptidomimetics by reacting Xaa-Pro-type FADIs with amino acid benzyl esters or peptides. This approach leverages the unique properties of the 2-nitrobenzenesulfonyl (Ns) group as an N-terminal protecting group, which promotes sulfonamide anion formation, effectively suppressing α-deprotonation and thereby preventing racemization or epimerization. Our findings highlight the pivotal role of the <i>N</i>-Ns group in peptide synthesis and provide a robust platform for expanding the utility of FADIs in peptidomimetic designing.

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Publication Details

Journal
Organic & Biomolecular Chemistry
Published
2025-01-01
DOI
https://doi.org/10.1039/d5ob00477b
Citations
1
Primary Topic
Fluorine in Organic Chemistry
Type
article
Field-Weighted Citation Impact
0.79
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article

Racemization-free peptide bond formation via 2-nitrobenzensulfonyl strategy for diastereoselective synthesis of (Z)-fluoroalkene-type peptidomimetics

Tetsuo Narumi, Nobuyuki Mase, Kohei Sato, Chihiro Iio
1 citations
Organic & Biomolecular Chemistry
Fluorine in Organic Chemistry
0.79
article

Racemization-free peptide bond formation via 2-nitrobenzensulfonyl strategy for diastereoselective synthesis of (Z)-fluoroalkene-type peptidomimetics

Tetsuo Narumi, Nobuyuki Mase, Kohei Sato, Chihiro Iio
article en
1 citations

Abstract

The Xaa-Pro-type (<i>Z</i>)-fluoroalkene dipeptide isostere (FADI) serves as a versatile surrogate for peptide bonds, effectively restricting <i>cis</i>-<i>trans</i> isomerization of the prolyl amide bond and offering advantages in the development of conformationally constrained peptide analogues. However, the diastereoselective synthesis of tripeptidomimetics incorporating Xaa-Pro-type FADIs is challenging due to the high susceptibility to racemization of the α-stereogenic center during peptide bond formation. Here, we introduce a racemization- and epimerization-free coupling strategy for the stereoselective synthesis of fluoroalkene-type peptidomimetics by reacting Xaa-Pro-type FADIs with amino acid benzyl esters or peptides. This approach leverages the unique properties of the 2-nitrobenzenesulfonyl (Ns) group as an N-terminal protecting group, which promotes sulfonamide anion formation, effectively suppressing α-deprotonation and thereby preventing racemization or epimerization. Our findings highlight the pivotal role of the <i>N</i>-Ns group in peptide synthesis and provide a robust platform for expanding the utility of FADIs in peptidomimetic designing.

Organic & Biomolecular ChemistryVol. 23(18)
Shizuoka University (JP)
Openalex Percentile: Top 29%
Fluorine in Organic Chemistry
0.79
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Racemization-free peptide bond formation <i>via</i> 2-nitrobenzensulfonyl strategy for diastereoselective synthesis of (<i>Z</i>)-fluoroalkene-type peptidomimetics — Tetsuo Narumi, Nobuyuki Mase, et al. · Organic & Biomolecular Chemistry (2025) | TGRS Research Map | TGRS