Characterization of Structure and Biological Activity of Cyclotide Mram 4: A Plant‐Derived Peptide
Abstract Cyclotides are a class of peptides generated from plants that exhibit a wide range of biological activity. This study seeks to isolate and characterize cyclotide mram 4 from the stem of Vietnamese Viola dalatensis Gadnep, employing extraction with 50% acetonitrile in miliQ‐water containing 1% formic acid, followed by salt precipitation, RP‐HPLC, LC–MS, and LC–MS/MS methods. A mixture of cyclotides and mram 4 shown significant antibacterial efficacy against Bacillus subtilis and Listeria ivanovii . The MIC results demonstrated the inhibitory effect of mram 4 on the growth of the specified bacteria, producing values of 0.63 µM for both B. subtilis and L. ivanovii . L. ivanovii is a strain that has not been previously examined in relation to cyclotides. The results show that a cyclotide mixture exhibits α‐amylase inhibitory activity (IC 50 = 32.65 ± 0.55 mg/mL), indicating its potential for future antidiabetic applications. The homological model of the 3D structure of mram 4 was constructed utilizing AlphaFoldDB structures as templates inside the SWISS‐MODEL homology modeling framework.
Authors
- Huu-Danh Bui
- Tam Tran (ORCID: https://orcid.org/0000-0002-7691-2888)
- Tien T. Dang (ORCID: https://orcid.org/0000-0002-3500-5958)
- Tu Viet Tran
- Nhu T. Q. Ngo
- Son H. Pham (ORCID: https://orcid.org/0009-0009-7804-8171)
- Nguyen Thai Huynh (ORCID: https://orcid.org/0000-0001-7581-9158)
Institutions
- Pham Ngoc Thach University of Medicine (VN)
- Ho Chi Minh City University of Industry and Trade (VN)
- Vietnam Academy of Science and Technology (VN)
Publication Details
- Journal
- ChemistrySelect
- Published
- 2025-04-01
- DOI
- https://doi.org/10.1002/slct.202405793
- Citations
- 1
- Primary Topic
- Biochemical and Structural Characterization
- Type
- article
- Field-Weighted Citation Impact
- 0.81
Funders
- Vietnam Academy of Science and Technology