Diploid chromosome-level genome assembly and annotation for Lycorma delicatula
The spotted lanternfly (Lycorma delicatula) is a planthopper species (Hemiptera: Fulgoridae) native to China but invasive in South Korea, Japan, and the United States where it is a significant threat to agriculture. Genomic resources are critical to both management of this species and understanding the genomic characteristics of successful invaders. We report an annotated, haplotype-phased, chromosome-level genome assembly for the spotted lanternfly using PacBio long-read sequencing, Hi-C technology, and RNA-seq. The 2.2 Gbp genome comprises 13 chromosomes, and whole genome resequencing of eighty-two adults indicated chromosome four as the sex chromosome and a corresponding XO sex-determination system. We identified over 12,000 protein-coding genes and performed functional annotation, facilitating the identification of candidate genes that may hold importance for spotted lanternfly control. The assemblies and annotations were highly complete with over 96% of BUSCO genes complete regardless of the database (i.e., Eukaryota, Arthropoda, Insecta). This reference-quality genome will serve as an important resource for development and optimization of management practices for the spotted lanternfly and invasive species genomics as a whole.
Authors
- Kristin M. Winchell (ORCID: https://orcid.org/0000-0002-5217-4809)
- Brenna A. Levine (ORCID: https://orcid.org/0000-0002-4326-591X)
- Anthony A. Snead (ORCID: https://orcid.org/0000-0002-5020-8729)
- Meng Fang (ORCID: https://orcid.org/0000-0002-9311-4298)
- Nicolas Largotta
Institutions
- American Museum of Natural History (US)
- Kean University (US)
- New York University (US)
Publication Details
- Journal
- Scientific Data
- Published
- 2025-04-05
- DOI
- https://doi.org/10.1038/s41597-025-04854-8
- Citations
- 1
- Primary Topic
- Plant Taxonomy and Phylogenetics
- Type
- article
- Field-Weighted Citation Impact
- 3.03
Funders
- Division of Biological Infrastructure