Homocysteine Thiolactone Modification of Ribonuclease A: Thermodynamics and Kinetics

Homocysteine thiolactone is a metabolite associated with various diseases at elevated levels in humans. Lysine residues in proteins are modified through N-homocysteinylation and homocysteinylated proteins are prone to form dimers and oligomers through disulfide cross-linkages. This study investigates the effects of N-homocysteinylation on Ribonuclease A (RNase A). The formation of dimers and higher oligomers in RNase A have been confirmed by SDS-PAGE and MALDI-ToF. Agarose-gel assays revealed an altered ribonucleolytic activity due to Lys modification. Fluorescence spectroscopy indicates local changes in the Tyr microenvironment. CD melting studies reveal that β-sheet formation is slightly enhanced with a reduction in the α-helical content in case of modified RNase A. However, the similar melting temperature of both native and modified RNase A indicates overall structural integrity with local changes in secondary structural components. ITC and UV-visible kinetics show reduced ribonucleolytic activity in homocysteinylated RNase A compared to the unmodified enzyme. These findings provide insights into the structural and functional consequences of RNase A homocysteinylation, contributing to our understanding of hyperhomocysteinemia-related pathologies.

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Publication Details

Journal
Proteins Structure Function and Bioinformatics
Published
2025-04-04
DOI
https://doi.org/10.1002/prot.26824
Primary Topic
Folate and B Vitamins Research
Type
article
Field-Weighted Citation Impact
0.00

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article

Homocysteine Thiolactone Modification of Ribonuclease A: Thermodynamics and Kinetics

Swagata Dasgupta, Kabira Sabnam
Proteins Structure Function and Bioinformatics
Folate and B Vitamins Research
article

Homocysteine Thiolactone Modification of Ribonuclease A: Thermodynamics and Kinetics

Swagata Dasgupta, Kabira Sabnam
article en

Abstract

Homocysteine thiolactone is a metabolite associated with various diseases at elevated levels in humans. Lysine residues in proteins are modified through N-homocysteinylation and homocysteinylated proteins are prone to form dimers and oligomers through disulfide cross-linkages. This study investigates the effects of N-homocysteinylation on Ribonuclease A (RNase A). The formation of dimers and higher oligomers in RNase A have been confirmed by SDS-PAGE and MALDI-ToF. Agarose-gel assays revealed an altered ribonucleolytic activity due to Lys modification. Fluorescence spectroscopy indicates local changes in the Tyr microenvironment. CD melting studies reveal that β-sheet formation is slightly enhanced with a reduction in the α-helical content in case of modified RNase A. However, the similar melting temperature of both native and modified RNase A indicates overall structural integrity with local changes in secondary structural components. ITC and UV-visible kinetics show reduced ribonucleolytic activity in homocysteinylated RNase A compared to the unmodified enzyme. These findings provide insights into the structural and functional consequences of RNase A homocysteinylation, contributing to our understanding of hyperhomocysteinemia-related pathologies.

Proteins Structure Function and BioinformaticsVol. 93(9)
Indian Institute of Technology Kharagpur (IN)
Indian Institute of Technology Kharagpur
Openalex Percentile: Top 90%
Folate and B Vitamins Research
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