A Lightweight Machine Learning Model for High Precision Gastrointestinal Stromal Tumors Identification

Gastrointestinal stromal tumors (GISTs), which usually develop with a significant malignant potential, are a serious challenge in stromal health. With Endoscopic ultrasound (EUS), GISTs can appear similar to other tumors. This study introduces a lightweight convolutional neural network model optimized for the classification of GISTs and leiomyomas using EUS images only. Models are constructed based on a dataset that comprises 13277 augmented grayscale images derived from 703 patients, ensuring a balanced representation between GIST and leiomyoma cases. The optimized model architecture includes seven convolutional units followed by fully connected layers. After being trained and evaluated with a 5-fold cross-validation, the optimized model achieves an average validation accuracy of 96.2%. The model achieved a sensitivity, specificity, positive predictive value, and negative predictive value of 97.7%, 94.7%, 94.6%, and 97.7%, respectively, and significantly outperformed endoscopists' assessments. The study highlights the model's robustness and consistency. Our results suggest that instead of using developed deep models with fine-tuning, lightweight models with their simpler designs may grasp the essence and drop speckle noise. A lightweight model as a hypothesis with fewer model parameters is preferable to a deeper model with 10 times the model parameters according to Occam's razor statement.

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Publication Details

Journal
Bioengineering
Published
2025-04-03
DOI
https://doi.org/10.3390/bioengineering12040381
Primary Topic
Gastrointestinal Tumor Research and Treatment
Type
article
Field-Weighted Citation Impact
0.00

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article

A Lightweight Machine Learning Model for High Precision Gastrointestinal Stromal Tumors Identification

Xin Sun, Xiaodong Zhang, Man Li, X. R. Zhou et al.
Bioengineering
Gastrointestinal Tumor Research and Treatment
article

A Lightweight Machine Learning Model for High Precision Gastrointestinal Stromal Tumors Identification

Xin Sun, Xiaodong Zhang, Man Li, X. R. Zhou, Yonghui Li, Yanqing Niu, X. H. Mo, Jing Shi
article en

Abstract

Gastrointestinal stromal tumors (GISTs), which usually develop with a significant malignant potential, are a serious challenge in stromal health. With Endoscopic ultrasound (EUS), GISTs can appear similar to other tumors. This study introduces a lightweight convolutional neural network model optimized for the classification of GISTs and leiomyomas using EUS images only. Models are constructed based on a dataset that comprises 13277 augmented grayscale images derived from 703 patients, ensuring a balanced representation between GIST and leiomyoma cases. The optimized model architecture includes seven convolutional units followed by fully connected layers. After being trained and evaluated with a 5-fold cross-validation, the optimized model achieves an average validation accuracy of 96.2%. The model achieved a sensitivity, specificity, positive predictive value, and negative predictive value of 97.7%, 94.7%, 94.6%, and 97.7%, respectively, and significantly outperformed endoscopists' assessments. The study highlights the model's robustness and consistency. Our results suggest that instead of using developed deep models with fine-tuning, lightweight models with their simpler designs may grasp the essence and drop speckle noise. A lightweight model as a hypothesis with fewer model parameters is preferable to a deeper model with 10 times the model parameters according to Occam's razor statement.

BioengineeringVol. 12(4)
Tianjin University (CN), Nankai University (CN), Second Hospital of Tianjin Medical University (CN), Tianjin haihe hospital (CN), Tianjin Medical University (CN)
National Natural Science Foundation of China
Good health and well-being
Openalex Percentile: Top 90%
Gastrointestinal Tumor Research and Treatment
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