Enzymatic Birch reduction via hydrogen atom transfer at [4Fe-4S]-OH2 and [8Fe-9S] clusters
The alkali metal- and ammonia-dependent Birch reduction is the classical synthetic method for achieving dihydro additions to arenes, typically yielding 1,4-cyclodienes. A mild biological alternative to this process are 1,5-dienoyl-coenzyme A (CoA)-forming class I and II benzoyl-CoA reductases (BCRs), widely abundant key enzymes in the biodegradation of aromatic compounds at anoxic environments. To obtain a comprehensive mechanistic understanding of class I BCR catalysis, we produced the active site subunits from a denitrifying bacterium and determined the X-ray structure of its substrate and product complexes at 1.4 Å revealing non-canonical double-cubane [8Fe-9S] and active site aqua-[4Fe-4S] clusters. Together with kinetic, spectroscopic and QM/MM studies, we provide evidence for a radical mechanism with a [4Fe-4S] cluster-bound water molecule acting as hydrogen atom and electron donor at potentials beyond the biological redox window. An analogous Birch-like radical mechanism is applied by class II BCRs with the catalytic water bound to a tungsten-bis-metallopterin cofactor. The use of activated, metal-bound water ligands as hydrogen atom donor serves as a basic blueprint for future enzymatic or biomimetic Birch reduction processes.
Authors
- G. Matthias Ullmann (ORCID: https://orcid.org/0000-0002-6350-798X)
- Eduardo Dı́az (ORCID: https://orcid.org/0000-0002-9731-6524)
- Ulrike Demmer (ORCID: https://orcid.org/0000-0003-0602-8357)
- Antonio J. Pierik (ORCID: https://orcid.org/0000-0002-1509-6370)
- Matthias Boll (ORCID: https://orcid.org/0000-0001-8062-8049)
- Jonathan Fuchs (ORCID: https://orcid.org/0009-0002-5190-2488)
- Ulrich Ermler (ORCID: https://orcid.org/0000-0002-9583-1418)
- Unai Fernández‐Arévalo
Institutions
- University of Freiburg (DE)
- Max Planck Institute of Biophysics (DE)
- Centro de Investigaciones Biológicas Margarita Salas (ES)
- Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau (DE)
- University of Bayreuth (DE)
Publication Details
- Journal
- Nature Communications
- Published
- 2025-04-04
- DOI
- https://doi.org/10.1038/s41467-025-58418-w
- Citations
- 2
- Primary Topic
- Metalloenzymes and iron-sulfur proteins
- Type
- article
- Field-Weighted Citation Impact
- 0.73
Funders
- Ministerio de Ciencia, Innovación y Universidades
- Deutsche Forschungsgemeinschaft
- Albert-Ludwigs-Universität Freiburg