A multicomponent similarity approach to identify potential substances of very high concern

• Multiple similarity modules are developed for identification of potential SVHCs. • Extended structural similarity with toxicophore, biological and physchem similarity. • Individual similarity modules do not outperform global structural similarity. • Combining the similarity modules provides more robust and interpretable predictions. • This approach can support improved screening and prioritization of potential SVHCs. The number of chemicals being placed on the market is increasing. As such, there is an increased need for screening and evaluation of chemical hazards and risks. Particularly, chemicals with intrinsic properties that are considered of very high concern are ideally identified and regulated before wide-spread use and exposure. The use of in silico tools can help to identify potential substances of very high concern (SVHCs). Earlier, predictive models have been developed that identify potential SVHCs based on global structural similarity to known SVHCs. Here in this study, these read-across similarity models have been extended with other similarity modules, including toxicophore, biological and physicochemical similarity. The newly developed SVHC similarity profiles do individually not outperform the existing global similarity model. However, combining these new modules in an extended similarity approach results in more comprehensive predictions and allows for improved interpretability and applicability to the broader chemical universe. As such, this new approach is thought to support model users in interpretation of the model-prediction, and can thereby contribute to better screening and prioritization of potential SVHCs.

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Publication Details

Journal
Computational Toxicology
Published
2025-04-05
DOI
https://doi.org/10.1016/j.comtox.2025.100343
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
0.00

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A multicomponent similarity approach to identify potential substances of very high concern

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Computational Toxicology
Computational Drug Discovery Methods
article

A multicomponent similarity approach to identify potential substances of very high concern

Emiel Rorije, Pim N.H. Wassenaar, Jordi Minnema, Yordan S. Yordanov, Willie J.G.M. Peijnenburg, Thimo Schotman
article en

Abstract

• Multiple similarity modules are developed for identification of potential SVHCs. • Extended structural similarity with toxicophore, biological and physchem similarity. • Individual similarity modules do not outperform global structural similarity. • Combining the similarity modules provides more robust and interpretable predictions. • This approach can support improved screening and prioritization of potential SVHCs. The number of chemicals being placed on the market is increasing. As such, there is an increased need for screening and evaluation of chemical hazards and risks. Particularly, chemicals with intrinsic properties that are considered of very high concern are ideally identified and regulated before wide-spread use and exposure. The use of in silico tools can help to identify potential substances of very high concern (SVHCs). Earlier, predictive models have been developed that identify potential SVHCs based on global structural similarity to known SVHCs. Here in this study, these read-across similarity models have been extended with other similarity modules, including toxicophore, biological and physicochemical similarity. The newly developed SVHC similarity profiles do individually not outperform the existing global similarity model. However, combining these new modules in an extended similarity approach results in more comprehensive predictions and allows for improved interpretability and applicability to the broader chemical universe. As such, this new approach is thought to support model users in interpretation of the model-prediction, and can thereby contribute to better screening and prioritization of potential SVHCs.

Computational ToxicologyVol. 34
Leiden University (NL), National Institute for Public Health and the Environment (NL)
Rijksinstituut voor Volksgezondheid en Milieu
Zero hunger
Openalex Percentile: Top 92%
Computational Drug Discovery Methods
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