New Bounds for the Optimal Density of Covering Single-Insertion Codes via the Turán Density

We prove that the density of any covering singleinsertion code <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">C</i> ⊆ <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">X<sup>r</sup></i> over the <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">n</i>-symbol alphabet X cannot be smaller than 1/<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i> + δ<sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><i>r</i></sub> for some positive real δ<sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><i>r</i></sub> not depending on <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">n</i>. This improves the volume lower bound of 1=(<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i> + 1). On the other hand, we observe that, for all sufficiently large <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i>, if <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">n</i> tends to infinity then the asymptotic upper bound of 7=(<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i> + 1) due to Lenz et al. (2021) can be improved to 4.911=(<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i> + 1). Both the lower and the upper bounds are achieved by relating the code density to the Turán density from extremal combinatorics. For the last task, we use the analytic framework of measurable subsets of the real cube [0; 1]<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><sup>r</sup></i>.

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Journal
IEEE Transactions on Information Theory
Published
2025-04-03
DOI
https://doi.org/10.1109/tit.2025.3557393
Primary Topic
DNA and Biological Computing
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article
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article

New Bounds for the Optimal Density of Covering Single-Insertion Codes via the Turán Density

Maksim Zhukovskii, Oleg Verbitsky, Oleg Pikhurko
IEEE Transactions on Information Theory
DNA and Biological Computing
article

New Bounds for the Optimal Density of Covering Single-Insertion Codes via the Turán Density

Maksim Zhukovskii, Oleg Verbitsky, Oleg Pikhurko
article en

Abstract

We prove that the density of any covering singleinsertion code <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">C</i> ⊆ <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">X<sup>r</sup></i> over the <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">n</i>-symbol alphabet X cannot be smaller than 1/<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i> + δ<sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><i>r</i></sub> for some positive real δ<sub xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><i>r</i></sub> not depending on <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">n</i>. This improves the volume lower bound of 1=(<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i> + 1). On the other hand, we observe that, for all sufficiently large <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i>, if <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">n</i> tends to infinity then the asymptotic upper bound of 7=(<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i> + 1) due to Lenz et al. (2021) can be improved to 4.911=(<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">r</i> + 1). Both the lower and the upper bounds are achieved by relating the code density to the Turán density from extremal combinatorics. For the last task, we use the analytic framework of measurable subsets of the real cube [0; 1]<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink"><sup>r</sup></i>.

IEEE Transactions on Information TheoryVol. 71(6)
Humboldt-Universität zu Berlin (DE), University of Warwick (GB), University of Sheffield (GB)
Deutsche Forschungsgemeinschaft, H2020 European Research Council
Openalex Percentile: Top 94%
DNA and Biological Computing
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