Attention rings for shape analysis and application to MRI quality control

The Adolescent Brain Cognitive Development (ABCD) Study collects extensive neuroimaging data, including over 20,000 MRI sessions, to understand brain development in children. Ensuring high-quality MRI data is essential for accurate analysis, but manual Quality Control (QC) is impractical for large datasets due to time and resource constraints. We propose an automated QC method using an ensemble model that leverages metrics from FSQC and a novel deep learning model for brain shape analysis that uses cortical thickness, curvature, sulcal depth, and surface area as input features. The ensemble model achieved an accuracy of 76%, while our method achieved an accuracy of 72.62%, with balanced precision, recall, and F1 scores for both classes. This automated method promises to improve QC processes and accelerate the analysis of ABCD data.

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Published
2025-04-02
DOI
https://doi.org/10.1117/12.3047233
Primary Topic
Medical Image Segmentation Techniques
Type
article
Field-Weighted Citation Impact
0.00

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article

Attention rings for shape analysis and application to MRI quality control

Beatriz Paniagua, Lucie Dole, Martin Styner, Juan Carlos Prieto et al.
Medical Image Segmentation Techniques
article

Attention rings for shape analysis and application to MRI quality control

Beatriz Paniagua, Lucie Dole, Martin Styner, Juan Carlos Prieto, Lucas Valladon, Florian Davaux, Jean Christophe Fillion
article en

Abstract

The Adolescent Brain Cognitive Development (ABCD) Study collects extensive neuroimaging data, including over 20,000 MRI sessions, to understand brain development in children. Ensuring high-quality MRI data is essential for accurate analysis, but manual Quality Control (QC) is impractical for large datasets due to time and resource constraints. We propose an automated QC method using an ensemble model that leverages metrics from FSQC and a novel deep learning model for brain shape analysis that uses cortical thickness, curvature, sulcal depth, and surface area as input features. The ensemble model achieved an accuracy of 76%, while our method achieved an accuracy of 72.62%, with balanced precision, recall, and F1 scores for both classes. This automated method promises to improve QC processes and accelerate the analysis of ABCD data.

Vol. 13410
University of North Carolina at Chapel Hill (US)
Foundation of Hope for Research and Treatment of Mental Illness
Openalex Percentile: Top 95%
Medical Image Segmentation Techniques
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Attention rings for shape analysis and application to MRI quality control — Beatriz Paniagua, Lucie Dole, et al. · (2025) | TGRS Research Map | TGRS