Data harmonization with StyleTransfer-GANs: enhancing non-invasive IDH classification in brain tumors

Isocitrate dehydrogenase (IDH) mutation status has emerged as an important prognostic marker in brain gliomas. Accurate non-invasive determination of IDH mutation status is crucial for effective therapy and prognosis. However, the variability in imaging protocols across institutions hinders the reliability of deep learning (DL) models used for IDH classification. To address data heterogeneity, a StyleTransfer-GAN ( <b><i>ST-net</i></b> ) was developed to harmonize multi-site MRI data. <b><i>ST-net</i></b> was applied to harmonize MR images from diverse databases while preserving critical imaging features. A high performing deep-learning network ( <b><i>MC-net</i></b> ) was used to assess the impact of style transfer on IDH classification. The results demonstrated that <b><i>ST-net</i></b> effectively aligned style features across datasets and minimized discrepancies caused by varied imaging protocols. The IDH classification accuracy improved post-harmonization, with enhancements in both sensitivity and specificity depending on the style transfer reference. Our study highlights the potential of data harmonization using GANs to improve the generalizability and clinical utility of DL models in neuro-oncology. It also provides a scalable solution adaptable to various neuroimaging tasks.

Authors

Institutions

Publication Details

Published
2025-04-02
DOI
https://doi.org/10.1117/12.3049148
Primary Topic
Radiomics and Machine Learning in Medical Imaging
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Data harmonization with StyleTransfer-GANs: enhancing non-invasive IDH classification in brain tumors

Richard J. Bruce, Kimmo J. Hatanpaa, Rajan Jain, James M. Holcomb et al.
Radiomics and Machine Learning in Medical Imaging
article

Data harmonization with StyleTransfer-GANs: enhancing non-invasive IDH classification in brain tumors

Richard J. Bruce, Kimmo J. Hatanpaa, Rajan Jain, James M. Holcomb, Ananth J. Madhuranthakam, Niloufar Saadat, Marco C. Pinho, Jason Bowerman, Toral Patel, Baowei Fei, Joseph A. Maldjian, Benjamin Wagner, Matthew Lee, Nghi Cong Dung Truong, Divya Reddy, Ganesh B Y Chandan
article en

Abstract

Isocitrate dehydrogenase (IDH) mutation status has emerged as an important prognostic marker in brain gliomas. Accurate non-invasive determination of IDH mutation status is crucial for effective therapy and prognosis. However, the variability in imaging protocols across institutions hinders the reliability of deep learning (DL) models used for IDH classification. To address data heterogeneity, a StyleTransfer-GAN ( <b><i>ST-net</i></b> ) was developed to harmonize multi-site MRI data. <b><i>ST-net</i></b> was applied to harmonize MR images from diverse databases while preserving critical imaging features. A high performing deep-learning network ( <b><i>MC-net</i></b> ) was used to assess the impact of style transfer on IDH classification. The results demonstrated that <b><i>ST-net</i></b> effectively aligned style features across datasets and minimized discrepancies caused by varied imaging protocols. The IDH classification accuracy improved post-harmonization, with enhancements in both sensitivity and specificity depending on the style transfer reference. Our study highlights the potential of data harmonization using GANs to improve the generalizability and clinical utility of DL models in neuro-oncology. It also provides a scalable solution adaptable to various neuroimaging tasks.

Vol. 13410
Southwestern Medical Center (US), Mayo Clinic in Arizona (US), Neurological Surgery (US), Southwestern Medical Center (US), New York University (US), The University of Texas Southwestern Medical Center (US)
National Institutes of Health, National Cancer Institute
Zero hunger
Openalex Percentile: Top 90%
Radiomics and Machine Learning in Medical Imaging
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.