Identifiability and model selection frameworks for models of high-grade glioma response to chemoradiation

We have developed a family of biology-based mathematical models of high-grade glioma (HGG), capturing the key features of tumour growth and response to chemoradiation. We now seek to quantify the accuracy of parameter estimation and determine, when given a virtual patient cohort, which model was used to generate the tumours. In this way, we systematically test both the parameter and model identifiability. Virtual patients are generated from unique growth parameters whose growth dynamics are determined by the model family. We then assessed the ability to recover model parameters and select the model used to generate the tumour. We then evaluated the accuracy of predictions using the selected model at four weeks post-chemoradiation. We observed median parameter errors from 0.04% to 72.96%. Our model selection framework selected the model that was used to generate the data in 82% of the cases. Finally, we predicted the growth of the virtual tumours using the selected model resulting in low error at the voxel-level (concordance correlation coefficient (CCC) ranged from 0.66 to 0.99) and global level (percentage error in total tumour cellularity ranged from -12.35% to 0.07%). These results demonstrate the reliability of our framework to identify the most appropriate model under noisy conditions expected in the clinical setting.This article is part of the theme issue 'Uncertainty quantification for healthcare and biological systems (Part 2)'.

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Publication Details

Journal
Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences
Published
2025-04-02
DOI
https://doi.org/10.1098/rsta.2024.0212
Citations
3
Primary Topic
Mathematical Biology Tumor Growth
Type
article
Field-Weighted Citation Impact
4.10

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article

Identifiability and model selection frameworks for models of high-grade glioma response to chemoradiation

Mihir Shanker, Thomas E. Yankeelov, Holly Langshaw, Bikash Panthi et al.
3 citations
Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences
Mathematical Biology Tumor Growth
4.10
article

Identifiability and model selection frameworks for models of high-grade glioma response to chemoradiation

Mihir Shanker, Thomas E. Yankeelov, Holly Langshaw, Bikash Panthi, David A. Hormuth, Wasif Talpur, Ernesto A. B. F. Lima, Sara Thrower, Caroline Chung, J.W. Goldman, Maguy Farhat, Khushi C. Hiremath, Kenan Atakishi
article en
3 citations

Abstract

We have developed a family of biology-based mathematical models of high-grade glioma (HGG), capturing the key features of tumour growth and response to chemoradiation. We now seek to quantify the accuracy of parameter estimation and determine, when given a virtual patient cohort, which model was used to generate the tumours. In this way, we systematically test both the parameter and model identifiability. Virtual patients are generated from unique growth parameters whose growth dynamics are determined by the model family. We then assessed the ability to recover model parameters and select the model used to generate the tumour. We then evaluated the accuracy of predictions using the selected model at four weeks post-chemoradiation. We observed median parameter errors from 0.04% to 72.96%. Our model selection framework selected the model that was used to generate the data in 82% of the cases. Finally, we predicted the growth of the virtual tumours using the selected model resulting in low error at the voxel-level (concordance correlation coefficient (CCC) ranged from 0.66 to 0.99) and global level (percentage error in total tumour cellularity ranged from -12.35% to 0.07%). These results demonstrate the reliability of our framework to identify the most appropriate model under noisy conditions expected in the clinical setting.This article is part of the theme issue 'Uncertainty quantification for healthcare and biological systems (Part 2)'.

Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering SciencesVol. 383(2293)
Livestrong Foundation (US), The University of Texas MD Anderson Cancer Center (US), The University of Queensland (AU), The University of Texas at Austin (US)
Cancer Prevention and Research Institute of Texas, National Cancer Institute
Openalex Percentile: Top 7%
Mathematical Biology Tumor Growth
4.10
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