Discovery of Indole Alkaloids Crienamides A and B from <i>Penicillium citrinum</i> by a Simulated MS/MS-Guided Molecular Network Strategy

The building blocks-based molecular network (BBMN) strategy is effective for targeted natural product identification but depends on existing MS/MS data. To address this, we propose the simulated MS/MS-guided molecular network (SMMN) strategy, which combines virtual molecule design and MS/MS simulation to identify novel compounds containing target building blocks. We developed the MZmol Analyzer, a user-friendly web tool, to automate the SMMN strategy. Using this approach and the target 6-methyl-l-pipecolate (6-MeP), we identified two new indole alkaloid hybrids, crienamides A and B. <i>In vitro</i> immunosuppressive assays showed that both compounds inhibited ConA-induced cell proliferation, with IC<sub>50</sub> values of 2.86 ± 1.33 μM and 0.96 ± 1.22 μM, respectively.

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Publication Details

Journal
Organic Letters
Published
2025-04-02
DOI
https://doi.org/10.1021/acs.orglett.5c00564
Primary Topic
Microbial Metabolism and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Discovery of Indole Alkaloids Crienamides A and B from Penicillium citrinum by a Simulated MS/MS-Guided Molecular Network Strategy

Ying Ye, Yonghui Zhang, Junjun Liu, Chunmei Chen et al.
Organic Letters
Microbial Metabolism and Applications
article

Discovery of Indole Alkaloids Crienamides A and B from Penicillium citrinum by a Simulated MS/MS-Guided Molecular Network Strategy

Ying Ye, Yonghui Zhang, Junjun Liu, Chunmei Chen, Qin Li, Jiale Zhang, Nanjin Ding, Yongqi Li, Hucheng Zhu, Yuanyang Peng, Shang Luo, Weiguang Sun
article en

Abstract

The building blocks-based molecular network (BBMN) strategy is effective for targeted natural product identification but depends on existing MS/MS data. To address this, we propose the simulated MS/MS-guided molecular network (SMMN) strategy, which combines virtual molecule design and MS/MS simulation to identify novel compounds containing target building blocks. We developed the MZmol Analyzer, a user-friendly web tool, to automate the SMMN strategy. Using this approach and the target 6-methyl-l-pipecolate (6-MeP), we identified two new indole alkaloid hybrids, crienamides A and B. <i>In vitro</i> immunosuppressive assays showed that both compounds inhibited ConA-induced cell proliferation, with IC<sub>50</sub> values of 2.86 ± 1.33 μM and 0.96 ± 1.22 μM, respectively.

Organic LettersVol. 27(14)
Culture Resource (EG), Huazhong University of Science and Technology (CN)
National Natural Science Foundation of China, National Key Research and Development Program of China, Fundamental Research Funds for the Central Universities
Openalex Percentile: Top 93%
Microbial Metabolism and Applications
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Discovery of Indole Alkaloids Crienamides A and B from <i>Penicillium citrinum</i> by a Simulated MS/MS-Guided Molecular Network Strategy — Ying Ye, Yonghui Zhang, et al. · Organic Letters (2025) | TGRS Research Map | TGRS