Identification of ferroptosis-related gene signatures in temporal lobe epilepsy with hippocampal sclerosis

We identified 141 FR-DEGs in TLE-HS, and these genes were enriched in T-cell activation involved in immune response and signaling pathways related to lipids and atherosclerosis. Further WGCNA was performed to select 47 overlapping FR-DEGs, which were significantly enriched in 13 biological processes and 14 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways, including the negative regulation of apoptotic process and ferroptosis. Four genes, namely <i>PDK4</i>, <i>SMPD1</i>, <i>GPT2</i>, and <i>METTL14</i>, were identified as signature genes in TLE-HS. Moreover, the ROC derived from the four genes in GSE205661 and GSE71058 for predicting TLE-HS had an area under the curve (AUC) of 0.988 and 0.929, respectively. Furthermore, the lncRNA-miRNA-mRNA network constructed from the 4 FR-DEGs consisted of 5 lncRNAs and 14 miRNAs. The signatures based on four FR-DEGs were found to be a strong predictor of TLE-HS, and they may represent valuable therapeutic targets for TLE-HS.

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Publication Details

Journal
Frontiers in Neuroscience
Published
2025-04-02
DOI
https://doi.org/10.3389/fnins.2025.1530182
Citations
1
Primary Topic
RNA modifications and cancer
Type
article
Field-Weighted Citation Impact
0.81

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article

Identification of ferroptosis-related gene signatures in temporal lobe epilepsy with hippocampal sclerosis

Fan Gao, Jinzi Li
1 citations
Frontiers in Neuroscience
RNA modifications and cancer
0.81
article

Identification of ferroptosis-related gene signatures in temporal lobe epilepsy with hippocampal sclerosis

Fan Gao, Jinzi Li
article en
1 citations

Abstract

We identified 141 FR-DEGs in TLE-HS, and these genes were enriched in T-cell activation involved in immune response and signaling pathways related to lipids and atherosclerosis. Further WGCNA was performed to select 47 overlapping FR-DEGs, which were significantly enriched in 13 biological processes and 14 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways, including the negative regulation of apoptotic process and ferroptosis. Four genes, namely <i>PDK4</i>, <i>SMPD1</i>, <i>GPT2</i>, and <i>METTL14</i>, were identified as signature genes in TLE-HS. Moreover, the ROC derived from the four genes in GSE205661 and GSE71058 for predicting TLE-HS had an area under the curve (AUC) of 0.988 and 0.929, respectively. Furthermore, the lncRNA-miRNA-mRNA network constructed from the 4 FR-DEGs consisted of 5 lncRNAs and 14 miRNAs. The signatures based on four FR-DEGs were found to be a strong predictor of TLE-HS, and they may represent valuable therapeutic targets for TLE-HS.

Frontiers in NeuroscienceVol. 19
Yanbian University Hospital (CN)
People's Government of Jilin Province
Openalex Percentile: Top 30%
RNA modifications and cancer
0.81
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