Timing Mechanism for a Low-Cost, Single Use, Nucleic Acid Amplification Diagnostic Test

Nucleic Acid Amplification Tests (NAATs) are used to diagnose infectious diseases such as tuberculosis (TB), SARS-CoV-2, and Human Papillomavirus (HPV). Conventional testing requires a bench-top system that limits its accessibility to potential patients. A self-contained, low-cost, single use NAAT would increase worldwide access to critical diagnostics. In support of an ongoing NAAT diagnostic project, we prototyped a timing mechanism to control the critical heating step that effects amplification. Herein we present a design consisting of a micro controller, a dual-channel Mosfet, and LEDs to visualize the operation. We selected electrical components that were low cost and tested the design for accuracy under two conditions: 1) the elevated temperatures required for the NAAT process and 2) a fluctuating power source, as would result from batteries suitable for a disposable device. We prototyped iteratively, ultimately demonstrating a design by creating a flex PCB approximately 3 cm by 2 cm with a cost less than 1 USD at scale. With this work, we aim to help further the development of more distributed and accessible diagnostic tests.

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Published
2024-10-11
DOI
https://doi.org/10.1109/urtc65039.2024.10937551
Primary Topic
Molecular Biology Techniques and Applications
Type
article
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article

Timing Mechanism for a Low-Cost, Single Use, Nucleic Acid Amplification Diagnostic Test

Eli Jaffe, Nevan C. Hanumara, Ziliang Kang, Suhan Kim et al.
Molecular Biology Techniques and Applications
article

Timing Mechanism for a Low-Cost, Single Use, Nucleic Acid Amplification Diagnostic Test

Eli Jaffe, Nevan C. Hanumara, Ziliang Kang, Suhan Kim, Sara Valencia Garcia, S. Gordon, Giovanni Traverso
article en

Abstract

Nucleic Acid Amplification Tests (NAATs) are used to diagnose infectious diseases such as tuberculosis (TB), SARS-CoV-2, and Human Papillomavirus (HPV). Conventional testing requires a bench-top system that limits its accessibility to potential patients. A self-contained, low-cost, single use NAAT would increase worldwide access to critical diagnostics. In support of an ongoing NAAT diagnostic project, we prototyped a timing mechanism to control the critical heating step that effects amplification. Herein we present a design consisting of a micro controller, a dual-channel Mosfet, and LEDs to visualize the operation. We selected electrical components that were low cost and tested the design for accuracy under two conditions: 1) the elevated temperatures required for the NAAT process and 2) a fluctuating power source, as would result from batteries suitable for a disposable device. We prototyped iteratively, ultimately demonstrating a design by creating a flex PCB approximately 3 cm by 2 cm with a cost less than 1 USD at scale. With this work, we aim to help further the development of more distributed and accessible diagnostic tests.

Massachusetts Institute of Technology (US)
Openalex Percentile: Top 77%
Molecular Biology Techniques and Applications
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Timing Mechanism for a Low-Cost, Single Use, Nucleic Acid Amplification Diagnostic Test — Eli Jaffe, Nevan C. Hanumara, et al. · (2024) | TGRS Research Map | TGRS