CancerTrialMatch: a computational resource for the management of biomarker-based clinical trials at a community cancer center
CancerTrialMatch was implemented and tested on Windows 11 (64-bit, 32 GB RAM) using WSL2 with Ubuntu 22.04. Docker 27.0.3 and Docker Compose 2.28.1 were used to build images and containers. Users can build it by cloning the repo and following the README instructions and supplemental file (cancertrialmatchsupplemental.pdf) . The source code and example data are available in GitHub and Figshare at https://github.com/AveraSD/CancerTrialMatch and 10.6084/m9.figshare.28447367 respectively.
Authors
- Padmapriya Swaminathan
- Casey Williams (ORCID: https://orcid.org/0000-0002-4667-7944)
- Shivani Kapadia (ORCID: https://orcid.org/0000-0002-1683-4742)
- Anu Amallraja (ORCID: https://orcid.org/0000-0001-7092-5779)
- Tobias Meißner (ORCID: https://orcid.org/0000-0002-9680-7153)
Institutions
- Memorial Sloan Kettering Cancer Center (US)
- Emory University (US)
- Avera Health (US)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-03-29
- DOI
- https://doi.org/10.1093/bioinformatics/btaf144
- Citations
- 1
- Primary Topic
- Cancer Genomics and Diagnostics
- Type
- article
- Field-Weighted Citation Impact
- 0.94