Advancing cancer care: unravelling genomic insights for precision medicine using meticulous predictive architecture

Advancements in genomic profiling have significantly enhanced oncology by enabling precise tumor classification. However, challenges such as high dimensionality and limited sample sizes persist. This study presents a predictive modeling framework integrating t-distributed stochastic neighbor embedding (t-SNE) with Kullback-Leibler divergence and Shannon entropy reduction for efficient dimensionality reduction. A hybrid decisive random forest classifier further enhances model robustness and generalizability. Evaluated on the TCGA Pancancer dataset encompassing five cancer types, the proposed model achieved 99% accuracy, demonstrating superior sensitivity and specificity. This approach provides a reliable and interpretable solution for cancer subtype classification, facilitating improved genomic-based diagnostics.

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Publication Details

Journal
Computer Methods in Biomechanics & Biomedical Engineering
Published
2025-03-31
DOI
https://doi.org/10.1080/10255842.2025.2477809
Citations
1
Primary Topic
Cancer Genomics and Diagnostics
Type
article
Field-Weighted Citation Impact
0.94
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article

Advancing cancer care: unravelling genomic insights for precision medicine using meticulous predictive architecture

Sharmila K. Wagh, Jayashree R. Prasad, Swati B. Bhonde
1 citations
Computer Methods in Biomechanics & Biomedical Engineering
Cancer Genomics and Diagnostics
0.94
article

Advancing cancer care: unravelling genomic insights for precision medicine using meticulous predictive architecture

Sharmila K. Wagh, Jayashree R. Prasad, Swati B. Bhonde
article en
1 citations

Abstract

Advancements in genomic profiling have significantly enhanced oncology by enabling precise tumor classification. However, challenges such as high dimensionality and limited sample sizes persist. This study presents a predictive modeling framework integrating t-distributed stochastic neighbor embedding (t-SNE) with Kullback-Leibler divergence and Shannon entropy reduction for efficient dimensionality reduction. A hybrid decisive random forest classifier further enhances model robustness and generalizability. Evaluated on the TCGA Pancancer dataset encompassing five cancer types, the proposed model achieved 99% accuracy, demonstrating superior sensitivity and specificity. This approach provides a reliable and interpretable solution for cancer subtype classification, facilitating improved genomic-based diagnostics.

Computer Methods in Biomechanics & Biomedical Engineering
MIT Art, Design and Technology University (IN), Amrutvahini College of Engineering
Openalex Percentile: Top 27%
Cancer Genomics and Diagnostics
0.94
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