Prediction of wheat fusarium head blight severity levels in southern Henan based on K-means-SMOTE and XGBoost algorithms

Fusarium head blight (FHB) is a destructive disease which adversely affects the yield of wheat. The occurrence and epidemic of wheat FHB are closely related to meteorological information. Firstly, by analyzing eight meteorological factors-rainfall (RAIN), average sunshine hours (ASH), average wind speed (AWS), average temperature (AT), highest temperature (HT), lowest temperature (LT), average relative humidity (ARH), and maximum temperature difference (MTD)-specific periods closely related to wheat FHB severity are identified. Based on this, a dataset for wheat FHB severity is constructed. After that, the wheat FHB severity levels are divided into four levels, and actual field data shows that the proportion of data for the high prevalence severity level is relatively small. To address data imbalance, the K-means-synthetic minority over-sampling technique (K-means-SMOTE) method is introduced to increase samples of underrepresented severity levels. Subsequently, a wheat FHB severity prediction model based on K-means-SMOTE and extreme gradient boosting (XGBoost) is constructed. Lastly, by combining the rankings of meteorological factors provided by the model and the biological characteristics of wheat FHB, the number of meteorological factors is reduced from eight to four (AWS 4.24-4.28, RAIN 4.5-4.19, ARH 4.12-4.16, LT 4.19-4.23), the accuracy and recall of the model remained unchanged at 0.8936, the F1 score increased from 0.8851 to 0.8898, and the precision decreased from 0.9249 to 0.9058. Although the precision has slightly decreased, most of the other evaluation indicators of the model remain unchanged or have improved, therefore the model is considered effective. Finally, comparative experiments with eight other models demonstrate the superiority of this approach.

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Publication Details

Journal
PeerJ Computer Science
Published
2025-03-31
DOI
https://doi.org/10.7717/peerj-cs.2638
Primary Topic
Mycotoxins in Agriculture and Food
Type
article
Field-Weighted Citation Impact
0.00

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article

Prediction of wheat fusarium head blight severity levels in southern Henan based on K-means-SMOTE and XGBoost algorithms

Shufeng Xiong, Lei Shi, Hong Peng, Yanting Li et al.
PeerJ Computer Science
Mycotoxins in Agriculture and Food
article

Prediction of wheat fusarium head blight severity levels in southern Henan based on K-means-SMOTE and XGBoost algorithms

Shufeng Xiong, Lei Shi, Hong Peng, Yanting Li, Xiaoyun Sun, S. Su, Qiang Wang
article en

Abstract

Fusarium head blight (FHB) is a destructive disease which adversely affects the yield of wheat. The occurrence and epidemic of wheat FHB are closely related to meteorological information. Firstly, by analyzing eight meteorological factors-rainfall (RAIN), average sunshine hours (ASH), average wind speed (AWS), average temperature (AT), highest temperature (HT), lowest temperature (LT), average relative humidity (ARH), and maximum temperature difference (MTD)-specific periods closely related to wheat FHB severity are identified. Based on this, a dataset for wheat FHB severity is constructed. After that, the wheat FHB severity levels are divided into four levels, and actual field data shows that the proportion of data for the high prevalence severity level is relatively small. To address data imbalance, the K-means-synthetic minority over-sampling technique (K-means-SMOTE) method is introduced to increase samples of underrepresented severity levels. Subsequently, a wheat FHB severity prediction model based on K-means-SMOTE and extreme gradient boosting (XGBoost) is constructed. Lastly, by combining the rankings of meteorological factors provided by the model and the biological characteristics of wheat FHB, the number of meteorological factors is reduced from eight to four (AWS 4.24-4.28, RAIN 4.5-4.19, ARH 4.12-4.16, LT 4.19-4.23), the accuracy and recall of the model remained unchanged at 0.8936, the F1 score increased from 0.8851 to 0.8898, and the precision decreased from 0.9249 to 0.9058. Although the precision has slightly decreased, most of the other evaluation indicators of the model remain unchanged or have improved, therefore the model is considered effective. Finally, comparative experiments with eight other models demonstrate the superiority of this approach.

PeerJ Computer ScienceVol. 11
Zhengzhou University of Light Industry (CN), Institute of Plant Protection (CN), Henan Agricultural University (CN)
National Natural Science Foundation of China, Natural Science Foundation of Hainan Province
Good health and well-being
Openalex Percentile: Top 96%
Mycotoxins in Agriculture and Food
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