A GTP-driven central carbon metabolism in the cellulolytic bacterium Ruminiclostridium cellulolyticum

In Ruminiclostridium cellulolyticum, the hexokinase and galactokinase were formerly shown to strongly prefer GTP over ATP, whereas the phosphofructokinase is PPi-dependent, suggesting an unconventional central carbon metabolism in this anaerobic bacterium. Herein, the characterization of all other kinases of this pivotal pathway led to the identification of their preferred NTP/NDP. The kinases involved in the first reactions, primarily functioning as NTP-consuming enzymes, appear to be GTP-dependent. In contrast, the enzymes catalyzing the downstream steps that mainly generate NTP, show no marked preference. Consequently, its central carbon metabolism appears essentially driven by GTP, whose cellular content nears that of ATP. Interestingly, in vivo reciprocal exchange of the GTP-dependent hexokinase in R. cellulolyticum by the ATP-dependent glucokinase from Escherichia coli and vice versa generates modified strains that still catabolize glucose and glucose disaccharides. Altogether our data suggest an unexpected diversity and flexibility in the functioning of this central pathway in bacteria.

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Publication Details

Journal
Communications Biology
Published
2025-03-30
DOI
https://doi.org/10.1038/s42003-025-07971-7
Citations
1
Primary Topic
Enzyme Structure and Function
Type
article
Field-Weighted Citation Impact
0.52

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article

A GTP-driven central carbon metabolism in the cellulolytic bacterium Ruminiclostridium cellulolyticum

Pascale de Philip, Sandrine Pagès, Séverine Gagnot, Gaël Brasseur et al.
1 citations
Communications Biology
Enzyme Structure and Function
0.52
article

A GTP-driven central carbon metabolism in the cellulolytic bacterium Ruminiclostridium cellulolyticum

Pascale de Philip, Sandrine Pagès, Séverine Gagnot, Gaël Brasseur, Henri‐Pierre Fierobe, Stéphanie Perret, Nicolas Vita, Nian Liu, Marion Holmière
article en
1 citations

Abstract

In Ruminiclostridium cellulolyticum, the hexokinase and galactokinase were formerly shown to strongly prefer GTP over ATP, whereas the phosphofructokinase is PPi-dependent, suggesting an unconventional central carbon metabolism in this anaerobic bacterium. Herein, the characterization of all other kinases of this pivotal pathway led to the identification of their preferred NTP/NDP. The kinases involved in the first reactions, primarily functioning as NTP-consuming enzymes, appear to be GTP-dependent. In contrast, the enzymes catalyzing the downstream steps that mainly generate NTP, show no marked preference. Consequently, its central carbon metabolism appears essentially driven by GTP, whose cellular content nears that of ATP. Interestingly, in vivo reciprocal exchange of the GTP-dependent hexokinase in R. cellulolyticum by the ATP-dependent glucokinase from Escherichia coli and vice versa generates modified strains that still catabolize glucose and glucose disaccharides. Altogether our data suggest an unexpected diversity and flexibility in the functioning of this central pathway in bacteria.

Communications BiologyVol. 8(1)
Centre National de la Recherche Scientifique (FR), Baylor College of Medicine (US), Aix-Marseille Université (FR)
Agence Nationale de la Recherche, Centre National de la Recherche Scientifique
Clean water and sanitation
Openalex Percentile: Top 40%
Enzyme Structure and Function
0.52
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A GTP-driven central carbon metabolism in the cellulolytic bacterium Ruminiclostridium cellulolyticum — Pascale de Philip, Sandrine Pagès, et al. · Communications Biology (2025) | TGRS Research Map | TGRS