Integrated promoter-capture Hi-C and Hi-C analysis reveals fine-tuned regulation of the 3D chromatin architecture in colorectal cancer

This study sheds light on the dynamic 3D genome organization in CRC, highlighting critical structural changes associated with disease-associated loci. The identification of nine dysregulated genes points to potential biomarkers for colorectal cancer, with implications for diagnostic and therapeutic strategies. The combination of Hi-C and PCHi-C offers a refined approach for detecting chromosomal interactions at a higher resolution, laying the foundation for future studies on cancer-associated chromatin architecture.

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Publication Details

Journal
Frontiers in Genetics
Published
2025-03-28
DOI
https://doi.org/10.3389/fgene.2025.1553469
Citations
1
Primary Topic
Genomics and Chromatin Dynamics
Type
article
Field-Weighted Citation Impact
0.81
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article

Integrated promoter-capture Hi-C and Hi-C analysis reveals fine-tuned regulation of the 3D chromatin architecture in colorectal cancer

Sanjeev Galande, Ajay Kumar Saw, Ayush Madhok, Soumyadeep Nandi et al.
1 citations
Frontiers in Genetics
Genomics and Chromatin Dynamics
0.81
article

Integrated promoter-capture Hi-C and Hi-C analysis reveals fine-tuned regulation of the 3D chromatin architecture in colorectal cancer

Sanjeev Galande, Ajay Kumar Saw, Ayush Madhok, Soumyadeep Nandi, Anupam Bhattacharya
article en
1 citations

Abstract

This study sheds light on the dynamic 3D genome organization in CRC, highlighting critical structural changes associated with disease-associated loci. The identification of nine dysregulated genes points to potential biomarkers for colorectal cancer, with implications for diagnostic and therapeutic strategies. The combination of Hi-C and PCHi-C offers a refined approach for detecting chromosomal interactions at a higher resolution, laying the foundation for future studies on cancer-associated chromatin architecture.

Frontiers in GeneticsVol. 16
Indian Institute of Science Education and Research Pune (IN), Shiv Nadar University (IN), Cotton University (IN), Institute of Advanced Study in Science and Technology (IN)
Openalex Percentile: Top 30%
Genomics and Chromatin Dynamics
0.81
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Integrated promoter-capture Hi-C and Hi-C analysis reveals fine-tuned regulation of the 3D chromatin architecture in colorectal cancer — Sanjeev Galande, Ajay Kumar Saw, et al. · Frontiers in Genetics (2025) | TGRS Research Map | TGRS