SE-GNN: Seed Expanded-Aware Graph Neural Network With Iterative Optimization for Semi-Supervised Entity Alignment

Entity alignment aims to use pre-aligned seed pairs to find other equivalent entities from different knowledge graphs and is widely used in graph fusion-related fields. However, as the scale of knowledge graphs increases, manually annotating pre-aligned seed pairs becomes difficult. Existing research utilizes entity embeddings obtained by aggregating single structural information to identify potential seed pairs, thus reducing the reliance on pre-aligned seed pairs. However, due to the structural heterogeneity of KG, the quality of potential seed pairs obtained using only a single structural information is not ideal. In addition, although existing research improves the quality of potential seed pairs through semi-supervised iteration, they underestimate the impact of embedding distortion produced by noisy seed pairs on the alignment effect. In order to solve the above problems, we propose a seed expanded-aware graph neural network with iterative optimization for semi-supervised entity alignment, named SE-GNN. First, we utilize the semantic attributes and structural features of entities, combined with a conditional filtering mechanism, to obtain high-quality initial potential seed pairs. Next, we designed a local and global awareness mechanism. It introduces initial potential seed pairs and combines local and global information to obtain a more comprehensive entity embedding representation, which alleviates the impact of KG structural heterogeneity and lays the foundation for the optimization of initial potential seed pairs. Then, we designed the threshold nearest neighbor embedding correction strategy. It combines the similarity threshold and the bidirectional nearest neighbor method as a filtering mechanism to select iterative potential seed pairs and also uses an embedding correction strategy to eliminate the embedding distortion. Finally, we will reach the optimized potential seeds after iterative rounds to input local and global sensing mechanisms, obtain the final entity embedding, and perform entity alignment. Experimental results on public datasets demonstrate the excellent performance of our SE-GNN, showcasing the effectiveness of the model. Our code is publicly available at <uri xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">https://github.com/ShuoShan1/SE-GNN</uri>.

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Publication Details

Journal
IEEE Transactions on Knowledge and Data Engineering
Published
2025-03-29
DOI
https://doi.org/10.1109/tkde.2025.3555586
Citations
3
Primary Topic
Advanced Graph Neural Networks
Type
article
Field-Weighted Citation Impact
7.44

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article

SE-GNN: Seed Expanded-Aware Graph Neural Network With Iterative Optimization for Semi-Supervised Entity Alignment

Shuo Shan, Tao Meng, Yuntao Shou, Wei Ai et al.
3 citations
IEEE Transactions on Knowledge and Data Engineering
Advanced Graph Neural Networks
7.44
article

SE-GNN: Seed Expanded-Aware Graph Neural Network With Iterative Optimization for Semi-Supervised Entity Alignment

Shuo Shan, Tao Meng, Yuntao Shou, Wei Ai, Keqin Li, Hongen Shao
article en
3 citations

Abstract

Entity alignment aims to use pre-aligned seed pairs to find other equivalent entities from different knowledge graphs and is widely used in graph fusion-related fields. However, as the scale of knowledge graphs increases, manually annotating pre-aligned seed pairs becomes difficult. Existing research utilizes entity embeddings obtained by aggregating single structural information to identify potential seed pairs, thus reducing the reliance on pre-aligned seed pairs. However, due to the structural heterogeneity of KG, the quality of potential seed pairs obtained using only a single structural information is not ideal. In addition, although existing research improves the quality of potential seed pairs through semi-supervised iteration, they underestimate the impact of embedding distortion produced by noisy seed pairs on the alignment effect. In order to solve the above problems, we propose a seed expanded-aware graph neural network with iterative optimization for semi-supervised entity alignment, named SE-GNN. First, we utilize the semantic attributes and structural features of entities, combined with a conditional filtering mechanism, to obtain high-quality initial potential seed pairs. Next, we designed a local and global awareness mechanism. It introduces initial potential seed pairs and combines local and global information to obtain a more comprehensive entity embedding representation, which alleviates the impact of KG structural heterogeneity and lays the foundation for the optimization of initial potential seed pairs. Then, we designed the threshold nearest neighbor embedding correction strategy. It combines the similarity threshold and the bidirectional nearest neighbor method as a filtering mechanism to select iterative potential seed pairs and also uses an embedding correction strategy to eliminate the embedding distortion. Finally, we will reach the optimized potential seeds after iterative rounds to input local and global sensing mechanisms, obtain the final entity embedding, and perform entity alignment. Experimental results on public datasets demonstrate the excellent performance of our SE-GNN, showcasing the effectiveness of the model. Our code is publicly available at <uri xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">https://github.com/ShuoShan1/SE-GNN</uri>.

IEEE Transactions on Knowledge and Data EngineeringVol. 37(6)
Central South University of Forestry and Technology (CN), State University of New York (US), Central South University (CN), SUNY New Paltz (US), South China University of Technology (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 4%
Advanced Graph Neural Networks
7.44
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