Assessment of Stress and Immune Gene Expression in Australasian Snapper (Chrysophrys auratus) Exposed to Chronic Temperature Change

<b>Background:</b> Snapper is a significant commercial, recreational, and cultural teleost species in New Zealand, with aquaculture potential. The impact of long-term (chronic) temperature changes on immune and stress responses have not been studied in snapper, yet they have a critical importance to the health status of the fish. <b>Methods:</b> We investigated a set of genes in 30 individual snapper including fin, head kidney, and liver tissue, fish (10 per group) were exposed to either warm (22 °C), cold (14 °C), or ambient temperatures (10.5-18.6 °C) for 3 months. <b>Results:</b> Analyses of experimental fish using NanoString technologies to assess stress- and immune-related genes in the three tissue types showed that 22 out of 25 genes changed significantly in the experiment, indicating the significant impacts of chronic temperature changes on stress and immune responses. Furthermore, using a combined dataset based on this study and a previous one testing the impact of acute temperature changes in snapper, we identified five genes in the non-lethal fin-clip samples that can predict internal organ health status. <b>Conclusions:</b> Taken together, our experiments demonstrate the potential of the NanoString gene expression assessment tool for the rapid monitoring of stress responses in snapper, which can aid in the selection of stress-resilient wild stocks, monitor species in aquaculture environments, and inform the selection of locations for aquaculture.