Machine Learning Strategies for Forecasting Mannosylerythritol Lipid Production Through Fermentation: A Proof-of-Concept

Fermentations are complex and often unpredictable processes. However, fermentation-based bioprocesses generate large volumes of data that are currently underexplored. These data can be used to develop data-driven models, such as machine learning (ML) models, to improve process predictability. Among various fermentation products, biosurfactants have emerged as promising candidates for several industrial applications. Nevertheless, the large-scale production of biosurfactants is not yet cost-effective. This study aims to develop forecasting methods for the concentration of mannosylerythritol lipids (MELs), a type of biosurfactant, produced in Moesziomyces spp. cultivation. Three ML models, neural networks (NNs), support vector machines (SVMs), and random forests (RFs), were used. An NN provided predictions with a mean squared error (MSE) of 0.69 for day 4 and 1.63 for day 7 and a mean absolute error (MAE) of 0.58 g/L and 1.1 g/L, respectively. These results indicate that the model’s predictions are sufficiently accurate for practical use, with the MAE showing only minor deviations from the actual concentrations. Both results are promising, as they demonstrate the possibility of obtaining reliable predictions of the MEL production on days 4 and 7 of fermentation. This, in turn, could help reduce process-related costs, enhancing its economic viability.

Authors

Institutions

Publication Details

Journal
Applied Sciences
Published
2025-03-28
DOI
https://doi.org/10.3390/app15073709
Citations
3
Primary Topic
Metabolomics and Mass Spectrometry Studies
Type
article
Field-Weighted Citation Impact
2.42

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Machine Learning Strategies for Forecasting Mannosylerythritol Lipid Production Through Fermentation: A Proof-of-Concept

Ana Fred, Nuno Torres Faria, Carlos A. V. Rodrigues, Sofia P. Agostinho et al.
3 citations
Applied Sciences
Metabolomics and Mass Spectrometry Studies
2.42
article

Machine Learning Strategies for Forecasting Mannosylerythritol Lipid Production Through Fermentation: A Proof-of-Concept

Ana Fred, Nuno Torres Faria, Carlos A. V. Rodrigues, Sofia P. Agostinho, Carolina A. Vares
article en
3 citations

Abstract

Fermentations are complex and often unpredictable processes. However, fermentation-based bioprocesses generate large volumes of data that are currently underexplored. These data can be used to develop data-driven models, such as machine learning (ML) models, to improve process predictability. Among various fermentation products, biosurfactants have emerged as promising candidates for several industrial applications. Nevertheless, the large-scale production of biosurfactants is not yet cost-effective. This study aims to develop forecasting methods for the concentration of mannosylerythritol lipids (MELs), a type of biosurfactant, produced in Moesziomyces spp. cultivation. Three ML models, neural networks (NNs), support vector machines (SVMs), and random forests (RFs), were used. An NN provided predictions with a mean squared error (MSE) of 0.69 for day 4 and 1.63 for day 7 and a mean absolute error (MAE) of 0.58 g/L and 1.1 g/L, respectively. These results indicate that the model’s predictions are sufficiently accurate for practical use, with the MAE showing only minor deviations from the actual concentrations. Both results are promising, as they demonstrate the possibility of obtaining reliable predictions of the MEL production on days 4 and 7 of fermentation. This, in turn, could help reduce process-related costs, enhancing its economic viability.

Applied SciencesVol. 15(7)
University of Lisbon (PT), Instituto de Telecomunicações (PT), Institute for Biotechnology and Bioengineering (PT)
Good Food Institute, Instituto de Telecomunicações, Institute for Bioengineering and Biosciences
Openalex Percentile: Top 12%
Metabolomics and Mass Spectrometry Studies
2.42
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.